Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4784 |
Symbol | |
ID | 4012552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 5068780 |
End bp | 5069961 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637944429 |
Product | major facilitator transporter |
Protein accession | YP_551561 |
Protein GI | 91790609 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACGC CGTCGCCTGT GCCGCGCGCC ATCGTGCTGG CGGTGATGGC GGGCCATTTC GTGGCCGCTT TCGCCGCGCT CGGCATGCCG CCGTTCTTCG CGCTGATCCT GGAGCAGTCG CTGCACAACG AGGCGCGCTA CCTGGCCGGC TGGTTCTACG TGGTGCCGAC CGCGTTCGCC GCGCTGAGCA GTCCCTGGTG GGGCCGGCTG GCGGACCGGT ATGGCAAGAA GAGGCTGCTG ATCCGCGCCC AGCTCGGGCT GGCCGCGAGC TTTCTGCTGG CCGGCTTTGC CACGAACACC TGGGTGTTCT TCGCGGCACT GGCACTGCAA GGCGTGCTGG GCGGCACCTT TGCGGCGTCC AATGCCTACC TGGCGACCAT CGCCAGCGGC CCGGCGCTGG CACGCGGCCT GACCGCCATG CAGTGGTCGG CGCGCGCCGC GCTGGTGGCC GCGCCGCTGG CGCTGGGACT GGCGTTGCAG GCGGGCGCCA GTTCGCCGAT CGAGATGTAC CGCTGGCTGG CACTGCTGCC GCTGGCCGCC GCGGCGCTGG CCGTTTGCCT GCCTGCGGGC GCCGCAGCGC AGAAAACGCC AGCCGCGCAC GAAGCTGCGG CGGTGGCCGA GGCCACGCCA CGGCAGGTCT ATGCGCTGCA GTTCGCCTTT GTGTTCGCGA CGGTGGTGAC CTTTCCCTAC TTCGCGCCGC ATGTGCAGCA GCGCTTCGCC GGACTGTCCA CCGGCATGGC CGGCCTGCTG TTCGGCCTGC CGCATGCCGT CTACCTGCTC GCGGCGCTGC CGCTGACCCG CTGGCTCGCC CGCGGCAGGC AGACCGTCAT CCTGGCTGCG GCGTTTGCCG CGCTGGCGCT GTGCCTGGTG GGCCAGGCCC TGGCCGGCTC GCTCGCCGCG CTGGTCGCGT GGCGAGGGGT GATGGGGCTG GCGATGACCG CCGGTTTTAT TGCGCTGCAC GGGCTGATCG CCGGGGTGGT GCATGGCAGC AGCGCCGGTC GCGCCTTCGG CTGGTTTGAG AGCAGCTCCA AATGGGGCGC GGTGGCGGCA GGCCTGTCGG CCGGCTTCGT CGCCCAGGCT TTCGGTCTGG CCGCGCCGTT TTTTCTCGGC GCAGCCATGG TGGCCTGCGC GGCGGCTTAC CTGACACTGG CGCCGCGCCA CCGGTTGCGC GCCAGCACCT GA
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Protein sequence | MMTPSPVPRA IVLAVMAGHF VAAFAALGMP PFFALILEQS LHNEARYLAG WFYVVPTAFA ALSSPWWGRL ADRYGKKRLL IRAQLGLAAS FLLAGFATNT WVFFAALALQ GVLGGTFAAS NAYLATIASG PALARGLTAM QWSARAALVA APLALGLALQ AGASSPIEMY RWLALLPLAA AALAVCLPAG AAAQKTPAAH EAAAVAEATP RQVYALQFAF VFATVVTFPY FAPHVQQRFA GLSTGMAGLL FGLPHAVYLL AALPLTRWLA RGRQTVILAA AFAALALCLV GQALAGSLAA LVAWRGVMGL AMTAGFIALH GLIAGVVHGS SAGRAFGWFE SSSKWGAVAA GLSAGFVAQA FGLAAPFFLG AAMVACAAAY LTLAPRHRLR AST
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