| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4716 |
|---|
| Symbol | |
|---|
| ID | 4012601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 5005431 |
|---|
| End bp | 5006309 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637944362 |
|---|
| Product | biotin--acetyl-CoA-carboxylase ligase |
|---|
| Protein accession | YP_551494 |
|---|
| Protein GI | 91790542 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.492677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCCT CCCCGACGGC CGCCCCGGCC TCCCCCCTCC TATGGCCCGC CGAGGCCATC
TGGGAGGCTG TAGCCCCCAC CTTGCCGGGG TTTACCGTGG AGGTCCTGCC GGAGATCGAC
TCGACCAACA GCGAGCTGAT GCGGCGCTTT CGCGGCAGCG CCGGTGCGCC GCCCCGGCCC
GAGCCCCTGC TGCTGGTGGC CGAACAGCAA ACCGCCGGGC GCGGGCGATC CGGCCGCAGC
TGGGAAAGCC GGCGTTCAGA CAGCCTGACT TTTTCCCTGG GCCTGCCCTT GCAGCCGGCC
GACTGGTCGG GCCTGTCGCT GGCCGTTGGC ATCAGCCTGG CGGAAAGCCT GGATCCCCGG
ACCGCAGGCC CGCCGGCCAT CGGCCTGAAA TGGCCCAACG ACCTCTGGCT GCGCAGCCAG
GCTGGCGAGA GCGAGCGCAA ACTGGCCGGC ATTCTGGTCG AGACCGCCAG CTGGGGCGGT
ATTCGCTATG TGGTGATCGG GGTCGGCATT AATATCTTGC CGGTGCAGCT TTCCGCTCCC
ACCTCCGGTT CGCCTGCCAC CATGGCCCCC GGCTGCCTGC AGGAGCTGCT GCCCGGCGTG
GACGCCGGCG AAGCGCTGCT GCGCGCGCTG CCTCCGCTGG TGCAGGCCGT GCAGGCTTTC
GAGCAGTTCG GCTTTGCGCC CTTCCAGGCG CGTTTTGCGG CGCGCGACGT GCTCGCCGGC
CGCGCCGTGA AGCTGTCGGA CGGCACCGAA GGCACGGCGC ACGGCGTCAG CGAAAGCGGC
GCCCTGCTGG TGCATACTGC GGCTGGCATG AAAGAAATCA CCAGCTCCGA AGTCAGCGTT
CGGCCGGTGT CGGCAGCGCA GGACAGCCGC CCATGCTGA
|
|---|
| Protein sequence | MTSSPTAAPA SPLLWPAEAI WEAVAPTLPG FTVEVLPEID STNSELMRRF RGSAGAPPRP
EPLLLVAEQQ TAGRGRSGRS WESRRSDSLT FSLGLPLQPA DWSGLSLAVG ISLAESLDPR
TAGPPAIGLK WPNDLWLRSQ AGESERKLAG ILVETASWGG IRYVVIGVGI NILPVQLSAP
TSGSPATMAP GCLQELLPGV DAGEALLRAL PPLVQAVQAF EQFGFAPFQA RFAARDVLAG
RAVKLSDGTE GTAHGVSESG ALLVHTAAGM KEITSSEVSV RPVSAAQDSR PC
|
|---|
| |