| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4609 |
|---|
| Symbol | |
|---|
| ID | 4012728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4889616 |
|---|
| End bp | 4890128 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637944258 |
|---|
| Product | SmpA/OmlA |
|---|
| Protein accession | YP_551390 |
|---|
| Protein GI | 91790438 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2913] Small protein A (tmRNA-binding) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCATGCG CGGTGCTGGC GTCCTGCAGC AGCGCGATCA ATCCGGTCAA CTGGGTGACC
CCCTACAAGG TGGATGTGAT CCAGGGCAAC TTCATCTCCA GTGAGCAGGT TGAGCAGCTG
CGGCCCGGCA TGAGCCGCGA CCAGGTCCGG GCAGTTCTCG GTACGCCCCT GATGGCGAGC
CTTTTCCATG CCGACCGCTG GGACTATGTC TTCACGCTGA AGCGGCAAGG CGTTGACTCC
CAGACCTACA AATACACCGT GTTCTTCAAC GGTGACCAGC TCGAGCGCTT TGCCGGCGAC
GCCATGCCCA GCGAGGCGGA GTTCATCGCC AAGCTGGACA ACAAGCGCAA ACTGGGCAAA
GTCCCTCCGC TGGAAGCCAC CGAAGAGCAA TTGAAGGCCG CCGAGAAGCC GTCTGCTGCC
AAGCCCGCCG CAGGGTCTGC CGCCGCCGTT GCCGCACCGC CGGCAAGCCC GCAAACCACG
GTCTACCCAC CGCTCGAAAG CCCGAAACAG TGA
|
|---|
| Protein sequence | MACAVLASCS SAINPVNWVT PYKVDVIQGN FISSEQVEQL RPGMSRDQVR AVLGTPLMAS
LFHADRWDYV FTLKRQGVDS QTYKYTVFFN GDQLERFAGD AMPSEAEFIA KLDNKRKLGK
VPPLEATEEQ LKAAEKPSAA KPAAGSAAAV AAPPASPQTT VYPPLESPKQ
|
|---|
| |