Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4561 |
Symbol | |
ID | 4012758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4825663 |
End bp | 4827459 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637944211 |
Product | glyoxylate carboligase |
Protein accession | YP_551343 |
Protein GI | 91790391 |
COG category | [R] General function prediction only |
COG ID | [COG3960] Glyoxylate carboligase |
TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.437986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAA TGAAGGCTGC AATGGCCGCC GTGCTCGTGA TGGAAAAAGA AGGCGTGACC CAGGCCTTTG GCGTGCCGGG CGCAGCCATC AACCCGCTGT ACGCCGCGCT GCGCGAGCGC CAGTCGATTA CCCACATCCT GGCGCGTCAC GTGGAAGGCG CCTCCCACAT GGCCGAGGGC TACACCCGCG CCAAGGCCGG CAACATTGGC GTGTGCATAG GCACCAGCGG CCCGGCCGGC ACCGACATGA TCACCGGGCT GTACTCGGCC ATTGCCGACA GCATTCCGAT TTTGTGCATC ACCGGCCAGG CGCCGCGCGC ACGGCTCTAC AAGGAAGACT TCCAGGCGGT GGACATCGAA TCGATTTCCA AGCCGGTGAC CAAGTGGAGC GTGACGGTGC GCGAGCCGGC CCAGGTGCCG CGCGCCTTCC AGCAGGCCTT TCACCTGATG CGTTCGGGCC GCCCCGGCCC GGTGCTGATT GACCTGCCGT TCGACGTGCA GATGGCCGAA ATCGAATTCG ACATCGACAC CTACGAACCG CTGCCGGTCT ACAAGCCGGC CGCCAGCCGC AAGCAGATCG AAAAGGCGCT CGACATGCTG GCCGCCGCCT CCAAGCCGCT GATCGTCGCC GGCGGCGGCA TCATCAATGC CGATGCGACC GACCTGCTGG TCGAGTTCGC CGAGCTGACC GGCGTGCCGG TGATTCCCAC GCTGATGGGC TGGGGCAGCA TTCCCGACGA CCACCCGCTG ATGGCGGGCA TGTGCGGCCT GCAGACCAGC CACCGCTACG GCAACGCCAC CATGCTGGCC AGTGACTTCG TGTTCGGCAT CGGCAACCGC TGGGCCAACC GCCACACCGG CTCGACCGAG GTCTACTGCA AGGGCCGCAC CTTTGTCCAC GTCGACATCG AACCGACGCA AATCGGCCGC GTGTTCAGCC CCGACTTCGG CATCGTCAGC GACGCCAAGG CCGCGTTGAC GCTGCTGGTC GAGGTGGCCC GCGAGCGCAA GGCGGCCAAG CGGCTGCGGG ACTACAGCGA ATGGGCGGCA CGCTGCGCCG AGCGCAAGAA ACTGATGCAC CGCAAGTCGC ACTTCACCGA GACACCGATC AAGCCGATGC GGGTGTACGA GGAGATGAAC AAGGTGTTTC CGCGCGACAC GATTTATGTG ACGACCATCG GCCTGTCGCA AATTGCCGGC GCGCAGTTCC TCAACGTCTA TGGGCCGCGC CAGTGGATCA ACTGCGGCCA GGCCGGCCCG CTGGGCTGGA CGATTCCGGC CGCGCTGGGC GTGGTGGCGG CTGACCCGAC GCGCACGGTG GTGGGCCTGT CGGGCGACTA CGACTTCCAG TTCCTGATGG AAGAGCTGGC CGTTGGCGCG CAGTTCAACC TGCCCTATGT GCAGGTGCTG GTGAACAACA GCTACCTGGG CCTGATTCGC CAGAGCCAGC GCGGCTTCGA CATGGACTAC TGCGTGCAGC TGGCATTTGA AAACCAGAAC GTGCCGGCAG GCGAAGGCGA TCTGCGCAGC TACGGCGTCG ATCACCAGGC AGTCGTGCAG GGCCTGGGCT GCAAATCCCT GCGCGTCACC GATCCCGAGA AGATTGAATC GGCGATGGTC GAGGCCCAGG CCATGGCGCG CAAATACCGC GTGCCGGTGG TGGTGGAAGT GATCCTGGAA AAAGTCACCA ACATTGCCAT GGGCACCGAA ATCGACAAGG TCAATGAGTT TGAAGACATT GACTGCCGCC ATCCCAAGGG CCGCGAGGGC CTGGAACTGG CCGGCCTGCT GGAGTAA
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Protein sequence | MAKMKAAMAA VLVMEKEGVT QAFGVPGAAI NPLYAALRER QSITHILARH VEGASHMAEG YTRAKAGNIG VCIGTSGPAG TDMITGLYSA IADSIPILCI TGQAPRARLY KEDFQAVDIE SISKPVTKWS VTVREPAQVP RAFQQAFHLM RSGRPGPVLI DLPFDVQMAE IEFDIDTYEP LPVYKPAASR KQIEKALDML AAASKPLIVA GGGIINADAT DLLVEFAELT GVPVIPTLMG WGSIPDDHPL MAGMCGLQTS HRYGNATMLA SDFVFGIGNR WANRHTGSTE VYCKGRTFVH VDIEPTQIGR VFSPDFGIVS DAKAALTLLV EVARERKAAK RLRDYSEWAA RCAERKKLMH RKSHFTETPI KPMRVYEEMN KVFPRDTIYV TTIGLSQIAG AQFLNVYGPR QWINCGQAGP LGWTIPAALG VVAADPTRTV VGLSGDYDFQ FLMEELAVGA QFNLPYVQVL VNNSYLGLIR QSQRGFDMDY CVQLAFENQN VPAGEGDLRS YGVDHQAVVQ GLGCKSLRVT DPEKIESAMV EAQAMARKYR VPVVVEVILE KVTNIAMGTE IDKVNEFEDI DCRHPKGREG LELAGLLE
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