Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4555 |
Symbol | |
ID | 4012752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4818461 |
End bp | 4819642 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637944205 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_551337 |
Protein GI | 91790385 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.703358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCTC TCAAAGGCAT TACCGTCGTC ACCCTGGAGC ACGCGATTGC TGCGCCCTTT GCCACGCGCC AGCTGGCCGA CCTGGGCGCA CGCGTCATCA AAATCGAGCG CCCCGGCGTG GGCGACTTTG CGCGCGGCTA TGACGAACGC GTGCGTGGCC TGGCCTCGCA TTTCGTCTGG ACCAACCGTT CCAAGGAAAG CCTCACGCTC GATGTGAAGC ATGACGAGGC ACAAAAAATC CTGCGGCGCC TCATTCTGGA AGAGGCCGAC GTGGTGGTGC AAAACCTCGC ACCCGGCGCA GCAGCGCGTC TGGGCTTGTC GTATGAAGCG CTGGCCAAAC TCAAGCCCGG CATCATCGTC TGCGACATCT CGGGCTATGG CAGCGACGGG CCCTACCGCG ACAAAAAAGC CTATGACCTG CTGATTCAAA GCGAAGCGGG TTTTGTGTCG GTCACTGGCA CACCCGACAC GCCCTCCAAG GCTGGCCCCT CGATCGCCGA CATTGCCGCA GGCATGTACG CCTACACCAA CATTCTGGCG GCACTGATGC ATCGCCAGCA AACCGGCGAA GGCCAACGCA TCGACGTGTC CATGCTGGAG TCGCTCACCG AATGGATGAA CTACCCGCTG TACTACGCCT TTGAGGGCGC TGCCCCGCCA CCTCGCGCCG GTGCCAGCCA CGCCACCATT TATCCCTATG GCCCCTTTCC TGCGGGTGAC GGCAAGACCG TGATGCTGGG TCTGCAAAAC GAGCGAGAGT GGAAAGTGTT TTGCGAAAAA GTCTTGTTGC AGCCCGCGCT GGCCAGCGAC AAACGCTTTT TAAGCAACGC CAAGCGCAGC ACAGAGCGAG CCGTGCTCTC TGCCTTGATC ATCGAAGCCT TTTCACATCT CACGGCCCAG CAGGTGGCGC AGCGGCTGGA GCAGGCCGGT ATTGCCAACG CGCAGGTCAA CACCATGAGC GAGGTGTGGG CGCACCCGCA GCTCAGGGCT CGCGATCGCT GGCATGAGGT GGCCACACCC GCAGGGCCGA TTCCTGCCCT GCTGCCACCG GGCTCCTGGC AACATGGCGC GCCGCGCATG GATGCCGTGC CCGCACTGGG CCAGCACACC GATGCGATCC TGGGCCACTA TGGTTACAGC GCAGAGCGCA TTGCGGATCT GCGCGCTGAA GGTGTCGTGT GA
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Protein sequence | MQPLKGITVV TLEHAIAAPF ATRQLADLGA RVIKIERPGV GDFARGYDER VRGLASHFVW TNRSKESLTL DVKHDEAQKI LRRLILEEAD VVVQNLAPGA AARLGLSYEA LAKLKPGIIV CDISGYGSDG PYRDKKAYDL LIQSEAGFVS VTGTPDTPSK AGPSIADIAA GMYAYTNILA ALMHRQQTGE GQRIDVSMLE SLTEWMNYPL YYAFEGAAPP PRAGASHATI YPYGPFPAGD GKTVMLGLQN EREWKVFCEK VLLQPALASD KRFLSNAKRS TERAVLSALI IEAFSHLTAQ QVAQRLEQAG IANAQVNTMS EVWAHPQLRA RDRWHEVATP AGPIPALLPP GSWQHGAPRM DAVPALGQHT DAILGHYGYS AERIADLRAE GVV
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