Gene Bpro_4492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4492 
Symbol 
ID4012845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4746988 
End bp4747656 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID637944144 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_551276 
Protein GI91790324 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.948214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.885148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCT TCCCGACCCT CATCGTCCCG GCCCCGGCTT TCGTCGCCGG GCTGGCGCTC 
AGCCTGTCGC TGATCATGGC CATCGGCCCG CAAAACGTGC ATGTGATGCG CATGGGCCTG
CTGCGCCAGC ATCTGTGGCT GACCATTGCG GTCTGCATCG CGACCGACGT GGTACTGATT
GCGGTCGGCG TGCTGGGGCT GGCGCATCTG GGTGGCCTGT CGGACAAACT GCAGGGCGCC
ATGGTGGGCG CGGGCGCGGC GGTGCTGATC GCCTACGGAG GCCAGGCCAT GCAGCGCTTT
CTCAGGCCTG CCGCAGCGGC GGCAGTCATG GCCACCCCGG GCCAGCCGTT GAACCCGCCC
GTCGGCACAG GCGTGTCACG CGGCCGAGCC ATCACGCTGG CGCTCGCCCT GTCGTGGCTC
AACCCACATG CCTGGCTGGA CACCGCCGTA TTGATTGGCT CAGCCTCGCT GGCCTACGCG
CAACCCGAAA ACGCGCTGTT TGGCCTGGGC GCGGCCGCGG GCTCGCTGCT GTGGTTCACC
GCGCTCGGCC TGGCGATGTG GTGGCTGGGC CAGCGGCTCA ACTCATCGCG CCTCTGGCGC
GCGCTCGATG GCCTGGTGGC GCTGATGATG TGGGGCACGG CCGGCTGGCT GCTGATCGGC
CTGCTTTAA
 
Protein sequence
MSAFPTLIVP APAFVAGLAL SLSLIMAIGP QNVHVMRMGL LRQHLWLTIA VCIATDVVLI 
AVGVLGLAHL GGLSDKLQGA MVGAGAAVLI AYGGQAMQRF LRPAAAAAVM ATPGQPLNPP
VGTGVSRGRA ITLALALSWL NPHAWLDTAV LIGSASLAYA QPENALFGLG AAAGSLLWFT
ALGLAMWWLG QRLNSSRLWR ALDGLVALMM WGTAGWLLIG LL