Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4492 |
Symbol | |
ID | 4012845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4746988 |
End bp | 4747656 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637944144 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_551276 |
Protein GI | 91790324 |
COG category | [R] General function prediction only |
COG ID | [COG1279] Lysine efflux permease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.948214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.885148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGCCT TCCCGACCCT CATCGTCCCG GCCCCGGCTT TCGTCGCCGG GCTGGCGCTC AGCCTGTCGC TGATCATGGC CATCGGCCCG CAAAACGTGC ATGTGATGCG CATGGGCCTG CTGCGCCAGC ATCTGTGGCT GACCATTGCG GTCTGCATCG CGACCGACGT GGTACTGATT GCGGTCGGCG TGCTGGGGCT GGCGCATCTG GGTGGCCTGT CGGACAAACT GCAGGGCGCC ATGGTGGGCG CGGGCGCGGC GGTGCTGATC GCCTACGGAG GCCAGGCCAT GCAGCGCTTT CTCAGGCCTG CCGCAGCGGC GGCAGTCATG GCCACCCCGG GCCAGCCGTT GAACCCGCCC GTCGGCACAG GCGTGTCACG CGGCCGAGCC ATCACGCTGG CGCTCGCCCT GTCGTGGCTC AACCCACATG CCTGGCTGGA CACCGCCGTA TTGATTGGCT CAGCCTCGCT GGCCTACGCG CAACCCGAAA ACGCGCTGTT TGGCCTGGGC GCGGCCGCGG GCTCGCTGCT GTGGTTCACC GCGCTCGGCC TGGCGATGTG GTGGCTGGGC CAGCGGCTCA ACTCATCGCG CCTCTGGCGC GCGCTCGATG GCCTGGTGGC GCTGATGATG TGGGGCACGG CCGGCTGGCT GCTGATCGGC CTGCTTTAA
|
Protein sequence | MSAFPTLIVP APAFVAGLAL SLSLIMAIGP QNVHVMRMGL LRQHLWLTIA VCIATDVVLI AVGVLGLAHL GGLSDKLQGA MVGAGAAVLI AYGGQAMQRF LRPAAAAAVM ATPGQPLNPP VGTGVSRGRA ITLALALSWL NPHAWLDTAV LIGSASLAYA QPENALFGLG AAAGSLLWFT ALGLAMWWLG QRLNSSRLWR ALDGLVALMM WGTAGWLLIG LL
|
| |