| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4445 |
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| Symbol | rplA |
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| ID | 4012867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4700069 |
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| End bp | 4700764 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637944094 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_551230 |
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| Protein GI | 91790278 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.369013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC TGACCAAGCG CCAAAAAACC ATCGGTGACA AGATCGACAG CAACAAGCTG
TACGCCCTGT CCGACGCCAT CGGTCTCGTG AAGGAATTCG CCGTCGCCAA GTTCGATGAG
TCCATCGACG TGGCTGTGCA GCTCGGCATT GATGCCAAGA AATCCGACCA GGTCGTTCGC
GGCGCCGTCG TGTTACCTAA CGGCACCGGC AAAACCAAGC GTGTGGCCGT GTTTGCCCAG
GGCGCCAAGG CTGAAGAGGC CAAGGCAGCC GGCGCAGACA TCGTCGGCAT GGACGACCTT
GCCGCCGAAA TCAAGGCCGG CAAGATGGAC TTTGACGTGG TGATTGCCTC CCCCGATGCG
ATGCGCATCG TGGGTACGCT GGGCCAGATC CTGGGCCCGC GCGGCCTGAT GCCCAACCCC
AAGGTTGGCA CCGTGACGCC CGATGTGGCG ACCGCCGTGA AAAACGCGAA AGCCGGCCAG
GTCCAGTTCC GTGTCGACAA GGCCGGTATC GTGCACGGCA CCATTGGCCG CCGTTCGTTT
GATACCGCCA AGCTGCAAGG CAACCTGGCT GCATTGATCG ATGCGCTGCA AAAAGCCAAG
CCTGCTTCGA GCAAAGGCGT GTATTTGAAG AAAGTCGCGG TTTCGTCAAC GATGGGTGTG
GGCGTTCGCG TCGACACGCA AACCATCGCG GCGTAA
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| Protein sequence | MSKLTKRQKT IGDKIDSNKL YALSDAIGLV KEFAVAKFDE SIDVAVQLGI DAKKSDQVVR
GAVVLPNGTG KTKRVAVFAQ GAKAEEAKAA GADIVGMDDL AAEIKAGKMD FDVVIASPDA
MRIVGTLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VQFRVDKAGI VHGTIGRRSF
DTAKLQGNLA ALIDALQKAK PASSKGVYLK KVAVSSTMGV GVRVDTQTIA A
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