| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4426 |
|---|
| Symbol | |
|---|
| ID | 4012881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4672616 |
|---|
| End bp | 4672984 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637944074 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_551211 |
|---|
| Protein GI | 91790259 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0537399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA TCCAGCGCCA CCACACGAAC GCCCGCATCA GCAAGATTGT GCGGCACGGC
GGCCTCCTAT ACCTTTGTGG CCAGACCGCT AAGGGCAGCC CGAGCGCGGC CGGCGACATT
TCCGCGCAGA CGACGGAGGT GCTTTCCCGC GTCGATGCCT TGCTGGCAGA AGGAGGTAGC
GACCGCACCC GGCTGCTGAC GGTCACGATT TACCTGCGCG ATATCGCCGA TTTCGCAGCG
ATGAACGTCG TGTGGGAAGC ATGGCTCGCA GGAATGCAGG CGGGCGCACC AGCCCGGACC
ACAGTCGAAG CCGCGCTGGC AACGGAAAGC CTGCGTGTGG AAATGACCGT GGTCGCCGCA
GCAGGCTGA
|
|---|
| Protein sequence | MTDIQRHHTN ARISKIVRHG GLLYLCGQTA KGSPSAAGDI SAQTTEVLSR VDALLAEGGS
DRTRLLTVTI YLRDIADFAA MNVVWEAWLA GMQAGAPART TVEAALATES LRVEMTVVAA
AG
|
|---|
| |