| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4408 |
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| Symbol | |
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| ID | 4012901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4653741 |
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| End bp | 4654775 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637944056 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_551193 |
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| Protein GI | 91790241 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.830984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0872893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTACGT TATCCACCCA TAACTTTTGG TTACTATTTG AGCCAGAACA CGAAAAGGCA
GTAGCTATGA AATTTCGACT TATTGAGATC TTCAGGGCAA TGATGGAATG CGGCACAGTT
ACAGCAGCAG CTCACTCGCT CAAGATCTCT CAGCCGGCGA TGACAAAGCA ACTCACCCAG
CTGCAAAGCG AGCTTGACTT AGTACTCTTC GAACAGCGCG GTGGACGTCT GGTGCCGACA
GCAGAAGCGA GAGCCCTCAT TGGTTCGATG GATCGGGCAT GGCGCAGCGT CATCGAGTTG
AAGGAAGTTG CCAGAGATGT GCGCGACATG CGACGCGGCC GACTCACAGT AGTCGCTTCC
CCGAGCTTCG CTCAGACGCT GATGGCCGAT TTCGTCACTC AGTTCTCTCG TGAATCGAGC
AAGGTCACAA TCGCGTTGCA CGCGCAATCT TCACCTCGTG TGATTGACTG GACAGCTGAC
GGACAGGCAG ATGTCGGAAT ATCAATGATC CTTGCGCCCC GTCCCGGCGT GCACGTGGAG
CCGCTGGGAA GTCTTGTTGG AGTTTGCGCG CTGCCAGTTG GCCACGCACT CGCTGCAAAT
AAGGTCATAC GTGCGGAGGA CCTCCATGGT CAGCGATTCA TCTCATTAGC CGAGATTGAT
GATGCGCGCT CCCGGGTCGA AGCTGCATTC GATGGGCAAG CGATAGAACG CGATATCGCT
TTGACAACAC CACAATCCGC AGTGGCATTA GCGCTTGTCA CGCATGGCGC CGGCGTGGCG
GTCATTGACG AGGCCACAGC GACGATGGCT GACCTGACTC GGGTGGCCAT CCGCCCATTC
TTGCCTACGG TGAGCTTTGA AGTCTATATG TACCATCCCG CGAATAGGGT GCCTTCACAG
TTGCATGAGC GGTTTGTGCG AAAGTTTCGG ACATGGTTTA AAGGCCGCCG TGCGATCGCG
AGAGCCACCA TCACCACATC GTTGTCGCAA ATATCTGCAT CCCGCGCGGA CTCGGCTCGT
GCACGCGGCA AATAA
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| Protein sequence | MATLSTHNFW LLFEPEHEKA VAMKFRLIEI FRAMMECGTV TAAAHSLKIS QPAMTKQLTQ
LQSELDLVLF EQRGGRLVPT AEARALIGSM DRAWRSVIEL KEVARDVRDM RRGRLTVVAS
PSFAQTLMAD FVTQFSRESS KVTIALHAQS SPRVIDWTAD GQADVGISMI LAPRPGVHVE
PLGSLVGVCA LPVGHALAAN KVIRAEDLHG QRFISLAEID DARSRVEAAF DGQAIERDIA
LTTPQSAVAL ALVTHGAGVA VIDEATATMA DLTRVAIRPF LPTVSFEVYM YHPANRVPSQ
LHERFVRKFR TWFKGRRAIA RATITTSLSQ ISASRADSAR ARGK
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