| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4361 |
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| Symbol | |
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| ID | 4012971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4601163 |
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| End bp | 4602251 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637944011 |
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| Product | spermidine/putrescine ABC transporter ATP-binding subunit |
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| Protein accession | YP_551148 |
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| Protein GI | 91790196 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000264978 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.276396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACC AGTTGCTCCC TGCCGTTTCC TTTCAGGGCG TCACTCGGCG GTACGGACTC
GTCAATGCGG TGAGCGACGT GAGCCTTGAC GTCTCGCCGG GGGAATTTTT CGCGCTGCTT
GGCTCGAGCG GTTCTGGCAA GACGACGCTT CTTATGCTCC TTGCAGGGTT CGATAAACCG
ACCGAAGGCC GCGTCCTGAT GTCGGGCACG TCTGTCTCCG ACGTGCCTCC GCATCGGCGG
CAAATCGGGG TGGTCTTCCA GAACTACGCG CTTTTCCCGC ATCTGACGGC TGCCGAAAAC
GTCGCCTATC CACTCAGGAT GCGCGGCGTC GGGCGTGCCG AGCGTGAGGC GCGAGTAAAG
TCGGCGCTCG GTCTCGTCAA CCTGACCGAT CGCGGGTCAT CGTATCCATC GCAGATGTCA
GGTGGGCAGC AGCAACGTGT GGCGCTCGCC CGAGCTCTCG TCTTCGGCCC CGACCTCCTG
CTTATGGACG AACCGCTCGG TGCCCTTGAT CGGAGGCTCC GCGATCAAAT GCAGCAAGAA
CTGAAGCGTA TCCAAGGCGA GCTCGGCATC ACGGTCATCT ACGTTACGCA TGACCAATCG
GAAGCCATGG CCATGGCCAA CCGTATCGGG ATCATGGCCG AGGGGCGGCT TCTGCAGGTT
GCGGATCCAG CAACCATCTA CGCCGCGCCG TCCAATCATT TCGTCGCACG TTTCCTCGGC
GATTGCTCGA TTCTGCGCGT CACCGCGACG GATGGCGGCC GCGGATACGA GATCTGTGGC
GTGCGTCAGC CATTGCTGTC TCCCGCAACG GCGCCTTTCG ATATTGTGGT GAGGCCAGAG
AACGTCGCAG TCCATCCCGT AGTGGAAGCC GTATCAGGCG ATATTTCCGG CGTCCCCGCG
ACGATACGTG ATGTTACATA TCTCGGCGCT GGCTGGCGCG TAACGCTGGA GCTTCCTGAC
GGGCAATCCC TGCTGGCCAG CATCGTGCGT GGAGATCACA AGAACGTATA CCTGGCGCCC
GGCGAACCCG TCGTCGCGCG ATGGGCGCCG ACATTCGTTG CCGCTCTTCC GGCTGAAAAA
TCTTCCTGA
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| Protein sequence | MKDQLLPAVS FQGVTRRYGL VNAVSDVSLD VSPGEFFALL GSSGSGKTTL LMLLAGFDKP
TEGRVLMSGT SVSDVPPHRR QIGVVFQNYA LFPHLTAAEN VAYPLRMRGV GRAEREARVK
SALGLVNLTD RGSSYPSQMS GGQQQRVALA RALVFGPDLL LMDEPLGALD RRLRDQMQQE
LKRIQGELGI TVIYVTHDQS EAMAMANRIG IMAEGRLLQV ADPATIYAAP SNHFVARFLG
DCSILRVTAT DGGRGYEICG VRQPLLSPAT APFDIVVRPE NVAVHPVVEA VSGDISGVPA
TIRDVTYLGA GWRVTLELPD GQSLLASIVR GDHKNVYLAP GEPVVARWAP TFVAALPAEK
SS
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