Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4336 |
Symbol | |
ID | 4012985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4573822 |
End bp | 4574193 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637943986 |
Product | endoribonuclease L-PSP |
Protein accession | YP_551123 |
Protein GI | 91790171 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.597458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA TCACTCGTAT CGCTACCACC AAGCGCCGCA GCAGCGTCGT GGTCTACAAC GGCATCGTCT TCGTAGGCGG GCAAACCGCC GATGACCGAA GCCAGGACAT CCGCGGCCAG ACCCGGCAGA CCCTGGAAAA GATAGACAAG TTTCTCGCCG AGGCTGGTAC CGACAAGAGC CGCTTGCTCA CCACGCAGAT CTGGCTCAAA GATATCAAGA ATGACTTCGT GGGCATGAAT GAGATCTGGG ATGCATGGAC TCCGCCTGGC GCGACGTCCA CCCGTGCCAC TGCCCAGTGC GAGATGGGAG CACCCGACGT TCTTATAGAG ATGATCGTCA CTGCGGCCAT CGCAAAAAAG GAAGTAGCAT AA
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Protein sequence | MNDITRIATT KRRSSVVVYN GIVFVGGQTA DDRSQDIRGQ TRQTLEKIDK FLAEAGTDKS RLLTTQIWLK DIKNDFVGMN EIWDAWTPPG ATSTRATAQC EMGAPDVLIE MIVTAAIAKK EVA
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