Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4313 |
Symbol | |
ID | 4012999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4546154 |
End bp | 4546990 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637943964 |
Product | extracellular solute-binding protein |
Protein accession | YP_551102 |
Protein GI | 91790150 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.438014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCTT TCTCGAAGCG CCGCGAGGAT CCCTCCCGTC GGCGCCTGCT GGCAGCTGTG CTCGCCGTTG CAGTGTCCCT CAGCGGCTGC GCAGCAGTGC CAGCGCCGAC CGAGCCCACG GCGGCGGCGC GCGCAGCGCT TGCGCCCACC GGTACGCTGC GTGTTGCGGT TTATCCGGGC AGTCCCACGT CCCTGGTCGA ACAGGCGCCG CCAGCGAGCA TGCGGGGTGT CAGCGTCGAT CTCGGCCGCT CGCTGGCAGT CAGGCTCGGC GTGCCCGTGC AAATCGCCGT CTACCCGCGC CTGGCGGAGG CTTTGGCTGC GCTGCAGCGC GGCGATGCGG ATTTCACGAT CACCAACGCC ACGGCTGAAC GTGCGCGCAT GGTGGATTTC GCGCCGACAC TCGTGGACCT CGAACTCGGC GTGCTGGTGC CGTCCACGTC GCGCGTCACG GCGGTCGAGC GGCTGGACCA GCCAGGTGTC ACAGTCGGCG TCAGCCAGGG CAGCTCCTCC GAGCGGGTGC TCGGCGCCCG CCTGACGCAG GCCAGGCTGC GTAGCTTCCC GACGCTGGAT GCCGCGCGTG CGGCGCTTCA GGCCCAAGAG GTCGATGCGT ACGCGACCAA CAAGGGCATT CTGTTCGAGC TGGCGGAGCG GGTGCCAGGT GCGCGCGTGC TGGAGGGCCG CTGGGGCACG GAGCATCTCG CGCCGGCCAT CCCCAAGGGC CGCGACGCCG GCATGCCTTA CCTGCGGGCC TTTACGGAGC AAGTCCGCGG CAACGGCGAA CTCGAACGCG CGGCCATGCG CGCGGGGCAG CGCGGCACAG TGCCGCCCGC ACGGTAG
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Protein sequence | MPSFSKRRED PSRRRLLAAV LAVAVSLSGC AAVPAPTEPT AAARAALAPT GTLRVAVYPG SPTSLVEQAP PASMRGVSVD LGRSLAVRLG VPVQIAVYPR LAEALAALQR GDADFTITNA TAERARMVDF APTLVDLELG VLVPSTSRVT AVERLDQPGV TVGVSQGSSS ERVLGARLTQ ARLRSFPTLD AARAALQAQE VDAYATNKGI LFELAERVPG ARVLEGRWGT EHLAPAIPKG RDAGMPYLRA FTEQVRGNGE LERAAMRAGQ RGTVPPAR
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