Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4290 |
Symbol | |
ID | 4013053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4526439 |
End bp | 4527365 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637943942 |
Product | LysR family transcriptional regulator |
Protein accession | YP_551080 |
Protein GI | 91790128 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.82906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGGC TTCAATCAAT GCGCGTGTTT CAACAGGTGG TGGACGACGG CAGCTTTGCC GCTGCCGCCC GTAAATTCGA CCTGTCGTCG GCCGTGGTGA CCCGGCTGGT CAGCGACCTG GAAGACCATC TGGGCGTGCG GCTGCTGCAT CGCACCACCC GGCGCATGGC ACTGACGGAT GCAGGTGTTG CCTACCTGGC TCGCGTGCGC CACATCCTGA GCGACATCGA CGAGGCCCAC GCGGCGGCGC AGGCGCATGC CCAGGAGATG TCCGGCGTGA TCCGCATCCT GACGCCGCCC ATCTTCGGTG TGCATGTGCT GGGGCCGCTG GTGGCCGAGT TCGGGCGACG CTATCCCAAG GTCGTGCTCG ATATTTACGT CGACTCGCCG CTCGTGCCGC CGGTGGAAGA CTACGACCTG ACGCTGCTGG GCGCGACCGA TACCTTTGAC GCCAACATCA TTGCGCGGCC GATTGCCTCG TCGGACGGCA TCCTGTGCGC CTCACCCGAC TACCTGCGCC GCAATGGCAT TCCGCAGCAG CCCGAAGACC TCGCCCGGCA CCGCTGCCTG CGGATCAAGG CACCGGCGAA CCGGCACCGC GTCTGGCGCC TCATCAATCC CGACGAGAAT AGGCGCGAAC TGGAAGTGCC GATCGAGCCC GCCATGCTGG TCAACCATTC CGACACGCTG ATACGCGCCG GTGTCGACGG AGCCGGCATC ATCAGCCAGT CGATCGACCT GGTGGCCAAC CACCTCCACA GCGGCGCGCT GAAACGAATC CTGTCGCCCT GGATCACGGG CACCAACACC CTGTACGCGG CGCTGCCCAG CCGCAAATTC ATTCCGGCAA GAACCAGCGT GTTTCTGGAA TTCATGACCG AGTACACGCG AACTGTGATC AAGAAAATGG ACGCGCGGCA CGACTGA
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Protein sequence | MDRLQSMRVF QQVVDDGSFA AAARKFDLSS AVVTRLVSDL EDHLGVRLLH RTTRRMALTD AGVAYLARVR HILSDIDEAH AAAQAHAQEM SGVIRILTPP IFGVHVLGPL VAEFGRRYPK VVLDIYVDSP LVPPVEDYDL TLLGATDTFD ANIIARPIAS SDGILCASPD YLRRNGIPQQ PEDLARHRCL RIKAPANRHR VWRLINPDEN RRELEVPIEP AMLVNHSDTL IRAGVDGAGI ISQSIDLVAN HLHSGALKRI LSPWITGTNT LYAALPSRKF IPARTSVFLE FMTEYTRTVI KKMDARHD
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