| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4287 |
|---|
| Symbol | |
|---|
| ID | 4013050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4522038 |
|---|
| End bp | 4524152 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637943939 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_551077 |
|---|
| Protein GI | 91790125 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.64368 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA AAACACCTAT TGAACGCTAC CGCAACATCG GCATCAGCGC TCACATTGAC
GCCGGCAAGA CCACCACGAC CGAGCGCATC CTGTTTTACA CCGGCGTGAA CTACAAGCTC
GGCGAGGTCC ACGAGGGAAC GGCCACCATG GACTGGATGG AGCAGGAGCA GGAGCGCGGC
ATCACCATCA CGTCCGCCGC GACGACCGCC TTCTGGAAAG GCATGGCCGG CAACTACCCG
GAACACCGCA TCAACATCAT CGACACACCG GGCCACGTCG ACTTCACGAT CGAGGTCGAG
CGCTCCATGC GCGTGCTCGA CGGCGCGGTG ATGGTCTACG ATTCCGTCGG CGGCGTGCAG
CCGCAGTCGG AAACCGTGTG GCGCCAGGCA AACAAGTACA AGGTGCCGCG CATTGCCTTC
GTCAACAAGA TGGACCGCGT GGGCGCCGAC TTTTTCCGCG TGCAGCGCCA GATCGGCGAG
CGCATGAAAG GCGTGGCGGT GCCGGTGCAG ATTCCGATCG GCGCCGAGGA TCACTTCCAG
GGCGTGGTCG ATCTGGTGAA GATGAAAGCC ATCGTCTGGG ACGACATCAG CCAGGGCCTG
CATTTCGAAT ACCGCGACAT TCCGGACGAG TTACTCGCCA CCGCCAGGAC CTGGCGTGAC
AAGATGATCG AGGCCGCCGC CGAAGCCAGC GAGCCCTTGC TGGAAAAGTA CCTCGCCGGC
GAAGCGCTGA GCGAAGACGA AATCCGGCAG GGAATCCGCC AGCGCACCGT CGCCAACGAG
ATCGTCCCGA TGCTGTGTGG CAGCGCCTTC AAGAACAAGG GGGTGCAGGC GCTGCTCGAT
GCCATCATCG ACTACCTGCC CTCACCGGTC GACGTGCCGG CCATCCTCGG CCACACCGAA
GACGACAAGA CCGCCGAGCG CCACCCCGGC GATAACGAGC CATTTTCGGC GCTCGCGTTC
AAGGTCATGA CGGACCCGTT TGTCGGGCAG CTGATCTTCT TTCGCGTCTA CTCGGGCGTG
GTCAAGACGG GCGACACCGT GTACATCCCG GGCAAGACGC GCAAGGAGCG GCTCGGGCGG
CTGCTGCAGA TGCATGCCAA CGTCCGCCAG GAAATCAAGG AAGTGCACGC CGGTGACATC
GCGGCGGCGG TCGGCCTGAA GGACGTGACC ACCGGCGACA CCCTGTGCGA CCCGGACAAG
GTGATCATGC TGGAGCGCAT GGTCTTTCCG GAGCCGGTGA TCTCCCAGGC CGTCGAGCCC
AAAACCCAGG CCGACCAGGA GAAGATGGGG GTGGCGCTGC ACCGGCTGGC CCAGGAAGAT
CCCTCGTTCC GGGTGCAGAC CGACGAAGAA TCCGGCCAGA CCATCATCTC GGGCATGGGC
GAGCTGCACC TGGAGATTCT GGTCGACCGG ATGAAGCGCG AGTTTGGCGT CGATGCGACC
GTCGGCAAAC CCCAGGTTGC CTACCGCGAG ACGATCAAGC AGGCCGTCAA GGACGTTGAA
GGCAAGTTCA TCAAGCAGTC GGGTGGGCGC GGCCAGTACG GCCACGCCGT GCTGAACGTC
GAGCCGCAGC CACCGGGCAA GGGCTATGAA TTCGTCGACG CCATCAAGGG CGGTGTGGTG
CCGCGCGAAT ACATTCCGGC GGTGGACAAG GGCATCCAGG ATGCGCTGAC GGCAGGCGTG
CTGGCGAGCT ACCCGGTGGT TGACGTGAAA GCCACGCTGG TCTTCGGCTC GTCGCACGAC
GTTGATTCGA ATGAAAACGC CTTCCGCATG GCCGGCGCCA TCGCGTTCCG GGAGGCCCTG
CGCCGCGCCA GGCCCATCCT GCTCGAACCC ATGATGGCGG TCGAAGTCGA AATGCCGGAA
GACTTCATGG GCCATGTGAT GGGCGACCTG TCCACGCGCC GCGGCATGAT CCAGGGCATG
GAAGACATCG CCGGCGGTGG CGGCAAGCTG GTGCGCGCCG AAGTGCCACT GAGCGAGATG
TTCGGTTACT CCACGACGCT GCGCTCCCTG ACGCAAGGCC GGGCCACCTA CACGATGGAG
TTCAAGCACT ACACGGAAGC CCCCGCCGAT GTGTCCGAAG CCATCATTCG CGGAAAAGGA
ATGGGCCGGC AATAA
|
|---|
| Protein sequence | MTRKTPIERY RNIGISAHID AGKTTTTERI LFYTGVNYKL GEVHEGTATM DWMEQEQERG
ITITSAATTA FWKGMAGNYP EHRINIIDTP GHVDFTIEVE RSMRVLDGAV MVYDSVGGVQ
PQSETVWRQA NKYKVPRIAF VNKMDRVGAD FFRVQRQIGE RMKGVAVPVQ IPIGAEDHFQ
GVVDLVKMKA IVWDDISQGL HFEYRDIPDE LLATARTWRD KMIEAAAEAS EPLLEKYLAG
EALSEDEIRQ GIRQRTVANE IVPMLCGSAF KNKGVQALLD AIIDYLPSPV DVPAILGHTE
DDKTAERHPG DNEPFSALAF KVMTDPFVGQ LIFFRVYSGV VKTGDTVYIP GKTRKERLGR
LLQMHANVRQ EIKEVHAGDI AAAVGLKDVT TGDTLCDPDK VIMLERMVFP EPVISQAVEP
KTQADQEKMG VALHRLAQED PSFRVQTDEE SGQTIISGMG ELHLEILVDR MKREFGVDAT
VGKPQVAYRE TIKQAVKDVE GKFIKQSGGR GQYGHAVLNV EPQPPGKGYE FVDAIKGGVV
PREYIPAVDK GIQDALTAGV LASYPVVDVK ATLVFGSSHD VDSNENAFRM AGAIAFREAL
RRARPILLEP MMAVEVEMPE DFMGHVMGDL STRRGMIQGM EDIAGGGGKL VRAEVPLSEM
FGYSTTLRSL TQGRATYTME FKHYTEAPAD VSEAIIRGKG MGRQ
|
|---|
| |