Gene Bpro_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4116 
Symbol 
ID4013210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4322075 
End bp4323106 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content63% 
IMG OID637943764 
Productcytochrome bd ubiquinol oxidase, subunit II 
Protein accessionYP_550907 
Protein GI91789955 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATC TTGCCCCTGA TCTGACGCAG GCCGCAGGCT GGATGCCGAT TGTTTTCCTG 
GTGGTGATGG GCCTGGCCAT GCTGGCCTAT GTGGTGCTGG ACGGCTATGA CCTGGGTGTG
GGAATGCTGA TGCACCGCGC CAGCGACGAC GACAAGGACA CCATGATCGC CAGCATTGGC
CCCTTCTGGG ATGCCAATGA AACCTGGCTG GTGCTGGGCG TGGGCATTTT GCTCACGGTG
TTTCCGCTGG CGCACGGCGT GATTCTGGGC GCCTTGTATC TGCCGGTGGC GATGATGCTG
ATCGGGCTGA CGCTGCGGGG CGTGGCCTTC GACTTTCGCG TGAAGGCGCA CGCGTCCCAC
AAGCCGCTGT GGAACCGCAT GTTTTACAGC GGCTCGCTGC TGGCCAGCTG GTCGCAGGGC
TACATGCTGG GCGCGCTGAT CACCGGCTTT GCCTCCACGG CCTGGGCCGT CGCCTTCAGT
GCCGTGATCG GGCTGGCGCT GGTGGCGGCC TATTGCCTGA TGGGCGCGGG CTGGCTCATC
ATCAAGTCAG AGGGGGAGCT TCAGCTGCAG GCCGTGCGCT GGGCGCGCCG CAGCCTGCTG
TTCACCGTGG CCGGCATTGC CGCGATTTCG ATTGCGACGC CGCTGGTCAG CCCGAGTATT
TTTTCCAAGT GGTTTTCCTT TCCGAACATT GTGCTGCTGT TGCCTATTCC TGCGGCAACC
GCCGTGCTGT TTGCGGTGAT CTATCGCAGC CTGCAGCGCC TGCCGGTGCG GCTGGCACAG
GGCAATGAAT ATGGCGCCTG GGTGCCTTTT GGCGCGACGG TGGGCGTGTT CCTGCTGGCG
TTTTACGGGC TGGCCTACAG CCTGTTTCCG TGGCTGGTGA TTGACAGCAT GACGATCTGG
CAGGCAGCCT CGGCGCCAGA GGCCATGGGC GTGATCCTGG CCGGCGCCGC CGTGGTGCTG
CCGTTGATCA TCGGCTACAC GGTGTTTGCC TACCGCGTGT TCTGGGGCAA GAGCACCGCG
CTGAAATATT GA
 
Protein sequence
MLDLAPDLTQ AAGWMPIVFL VVMGLAMLAY VVLDGYDLGV GMLMHRASDD DKDTMIASIG 
PFWDANETWL VLGVGILLTV FPLAHGVILG ALYLPVAMML IGLTLRGVAF DFRVKAHASH
KPLWNRMFYS GSLLASWSQG YMLGALITGF ASTAWAVAFS AVIGLALVAA YCLMGAGWLI
IKSEGELQLQ AVRWARRSLL FTVAGIAAIS IATPLVSPSI FSKWFSFPNI VLLLPIPAAT
AVLFAVIYRS LQRLPVRLAQ GNEYGAWVPF GATVGVFLLA FYGLAYSLFP WLVIDSMTIW
QAASAPEAMG VILAGAAVVL PLIIGYTVFA YRVFWGKSTA LKY