Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3996 |
Symbol | |
ID | 4013324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4191619 |
End bp | 4192728 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637943645 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_550788 |
Protein GI | 91789836 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAT ACGAACAACT CCAGATTCGC CTGAAGAGCG AGCCCCGTGC CTGGCTCGTC ACTGGGGTTG CCGGCTTTAT TGGCAGCAAT CTGCTGGAAG CTCTGCTCAA GCTGGGCCAG CGCGTGGTCG GACTGGACAA CTTTGCCACC GGCTACCAGC GCAACCTGGA CGAAGTGCAA ACGCTGGTCT CTCCTGAGCA GTGGGCCAAT TTCCACTTCA TTGAGGGCGA CATCCGTAAC CTGCCCGATT GCCAGCGTGC CATGTCTTGG CCCCCTCTCC CCACGGAAGA CGGTAGGGGT GAGGGCTCTC CCGTCGACTA CGTCCTTCAC CAGGCAGCCC TGGGCAGCGT GCCCCGGTCA CTGGCCGATC CCATCACCAC CAACGCCGCC AACATCACGG GTTTCCTGAA CATGCTGGTG GCCGCACGCG ACGCCGGGGT CAAAAGCTTT ACCTACGCCG CCAGCAGCAG CACCTACGGG GATCACCCGG CTCTGCCCAA GGTAGAGCAC ACCATCGGCA AACCGCTCAG CCCCTATGCG GTGACCAAAT ATGTGAACGA GCTGTATGCC GAGGTATTTG CCCGCTGCTA CGGCTTTAAC ACCATAGGTT TGCGCTACTT CAATGTGTTT GGTGCACGGC AAAATCCCAG TGGGGCCTAT GCCGCTGTGA TCCCGAAATG GACCGCAGCG ATGATGAAAG GGGAAGACGT GTTCATCAAC GGCGATGGTG AAACCAGCCG GGACTTCTGC TACGTGGCCA ACGCGGTGCA AGCCAACCTG TTGGCGGCGA CCGTGAGTGA TCTCCCTCTC CCCCTGGAAG AGGGCGGGGG TGAGGGCTCT CCTACCAACC AGGTGTACAA CGTGGCCGTG GGTGATCGCA CTACGCTGAA CACCCTGTTT GGCCTGATAC GTGACAACTT GATTGCACGT GGCGTGCCTG TCAGTACCGA GCCCAAGTAT CGGGATTTCC GTGCGGGCGA CGTGCGTAAC AGCCTGGCCG ACATCGGCAA GGCCCATCGG ATGCTGGGTT ACGCCCCTAC CCATCGCATA GACCAGGGAT TGCAGTTGGC GATTCCTTGG TATGTCCAGA ACTGCAAGGT TTCATCATGA
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Protein sequence | MTAYEQLQIR LKSEPRAWLV TGVAGFIGSN LLEALLKLGQ RVVGLDNFAT GYQRNLDEVQ TLVSPEQWAN FHFIEGDIRN LPDCQRAMSW PPLPTEDGRG EGSPVDYVLH QAALGSVPRS LADPITTNAA NITGFLNMLV AARDAGVKSF TYAASSSTYG DHPALPKVEH TIGKPLSPYA VTKYVNELYA EVFARCYGFN TIGLRYFNVF GARQNPSGAY AAVIPKWTAA MMKGEDVFIN GDGETSRDFC YVANAVQANL LAATVSDLPL PLEEGGGEGS PTNQVYNVAV GDRTTLNTLF GLIRDNLIAR GVPVSTEPKY RDFRAGDVRN SLADIGKAHR MLGYAPTHRI DQGLQLAIPW YVQNCKVSS
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