Gene Bpro_3985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3985 
Symbol 
ID4013352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4178964 
End bp4179524 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content56% 
IMG OID637943634 
Productsugar transferase 
Protein accessionYP_550777 
Protein GI91789825 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGTC TGTTTGATTT GGTGCTGGCC CTGTGCGCCG CCGTGATTCT GCTGCTGCCA 
TTAATGGTGG TGGCCCTGGC GGTGCGCCTG ACTTCGCCGG GGCCGGTCCT GTACTGGTCA
GACCGGGTGG GCAAGGGCAA CAGGATTTTC AAAATGCCCA AATTTCGCAG CATGCGAATG
GGCACGCCGG CTGTGGCCAC GCATCTGCTG GAGGACCCCA AGGCCTATCT CACGCCCATA
GGTTCTTTTC TTCGAAAAAG CAGCCTGGAC GAGTTACCGC AGTTGTGGAG CATTATCAGG
GGCGATATGA GTTTTGTCGG GCCCCGGCCC GCGTTGTTTA ATCAGCATGA TTTGATTGCC
CTGCGTACCC AATATGGTGT GGATAAGCTC CTTCCCGGCT TGACGGGCTG GGCTCAGGTG
AATGGGCGGG ACGAATTACC CGTTTTCCAA AAGGTCCAGC TTGATACCGA ATACGTGCGG
CGCCAGTCGC TGTTTTTTGA TATGAAGATA ATCGGCCTGA CTTTCTACCG GGTGATCAGG
CGGGACAGTA TTACCCATTA A
 
Protein sequence
MKRLFDLVLA LCAAVILLLP LMVVALAVRL TSPGPVLYWS DRVGKGNRIF KMPKFRSMRM 
GTPAVATHLL EDPKAYLTPI GSFLRKSSLD ELPQLWSIIR GDMSFVGPRP ALFNQHDLIA
LRTQYGVDKL LPGLTGWAQV NGRDELPVFQ KVQLDTEYVR RQSLFFDMKI IGLTFYRVIR
RDSITH