Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3985 |
Symbol | |
ID | 4013352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4178964 |
End bp | 4179524 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637943634 |
Product | sugar transferase |
Protein accession | YP_550777 |
Protein GI | 91789825 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCGTC TGTTTGATTT GGTGCTGGCC CTGTGCGCCG CCGTGATTCT GCTGCTGCCA TTAATGGTGG TGGCCCTGGC GGTGCGCCTG ACTTCGCCGG GGCCGGTCCT GTACTGGTCA GACCGGGTGG GCAAGGGCAA CAGGATTTTC AAAATGCCCA AATTTCGCAG CATGCGAATG GGCACGCCGG CTGTGGCCAC GCATCTGCTG GAGGACCCCA AGGCCTATCT CACGCCCATA GGTTCTTTTC TTCGAAAAAG CAGCCTGGAC GAGTTACCGC AGTTGTGGAG CATTATCAGG GGCGATATGA GTTTTGTCGG GCCCCGGCCC GCGTTGTTTA ATCAGCATGA TTTGATTGCC CTGCGTACCC AATATGGTGT GGATAAGCTC CTTCCCGGCT TGACGGGCTG GGCTCAGGTG AATGGGCGGG ACGAATTACC CGTTTTCCAA AAGGTCCAGC TTGATACCGA ATACGTGCGG CGCCAGTCGC TGTTTTTTGA TATGAAGATA ATCGGCCTGA CTTTCTACCG GGTGATCAGG CGGGACAGTA TTACCCATTA A
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Protein sequence | MKRLFDLVLA LCAAVILLLP LMVVALAVRL TSPGPVLYWS DRVGKGNRIF KMPKFRSMRM GTPAVATHLL EDPKAYLTPI GSFLRKSSLD ELPQLWSIIR GDMSFVGPRP ALFNQHDLIA LRTQYGVDKL LPGLTGWAQV NGRDELPVFQ KVQLDTEYVR RQSLFFDMKI IGLTFYRVIR RDSITH
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