Gene Bpro_3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3968 
Symbol 
ID4013374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4160994 
End bp4162088 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content66% 
IMG OID637943617 
Producthypothetical protein 
Protein accessionYP_550760 
Protein GI91789808 
COG category[C] Energy production and conversion 
COG ID[COG2055] Malate/L-lactate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCC AAAACACCTT CAATACCCTC ATGAGCCACA CCATCTCCGC CGCCCAGTTA 
CGAGCCCAGG TAGCTACTGT TTTAAAAGCC GCCGGCAGCT CCGCCGAAGA GGCCACCACC
GTCGCCGCCA ACCTGGTGCT GGCCAACCTG AGCGGCCACG ACTCGCACGG CGTGGGCATG
CTGCCGCGTT ATGTGGATGC CGTGCTCGAA GGCGGCCTGA AACCCAACAG CAGCGTGCGG
GTAGTCCTCG ACACCGGCTC GCTGCTGACA CTGGACGGCC AGCGCGGCTA CGGCCAGATC
GTCGGCGAGC AGGCGATGGC GCTGGGCATA GACCGCGCCA AGGCCCATGG CAGCTGCATC
ATGACGCTGG GCAATGCCCA CCATCTGGGC CGCATCGGGC ACTTCGCCGA AATGGCGGTG
GATCAAGGCC TGGTGTCCCT GCATTTTGTC AACGTGCTGT CGCGACCGGT GGTGGCGCCG
TTTGGCGGAG GCGATGGCCG CTTTGGCACA AACCCCTGCT GCATTGGCGT GCCGCTCAAG
GGCCGTGAAC CCTTCGTGTT GGACTTTGCG ACCAGCCGCG TGGCGCAGGG CAAGATGCGT
GTGGCCCATA ACAAGGGGAT TCAGGTCGAG CCCGGCACAC TCATCGACGA ACACGGACGC
CCGACCACCG ACCCGGGTGT GGTGGTGGTA CCCCAGAGCA ATGGGCTGTT TGGTGCGCTG
CTGGCTTTTG GCGAGCACAA GGGTTACGGC ATGGCCGTGG CCTGCGAACT GCTGGGCGGC
GCGCTGACCG GCGGCGGCAC CTGGCACAAA GCCACCGACC CGGCCGTGCG CGCCGTCGTC
AATGGCATGC TGACGATTTT GATCGACCCG GCCAAGCTGG GCACCCAGGC CGCTTTCGAG
CAGGAAGCGG TGGCCTTTGT GGACTGGCTC CAGGCCGGGC CGGTCGCACC CGGCTTTGAC
GCCGTGCAGA TTGCCGGCGA CCCGGAGCGC GCCACCCGCG CGCAGCGCGA AGTCGAAGGC
ATTGCGGTGG ATGACCAGAC CTGGCAAGAG ATGGTTGCCG CCGGCCGCAA GGTCGGTGCG
ACCCTGCAGG ACTGA
 
Protein sequence
MESQNTFNTL MSHTISAAQL RAQVATVLKA AGSSAEEATT VAANLVLANL SGHDSHGVGM 
LPRYVDAVLE GGLKPNSSVR VVLDTGSLLT LDGQRGYGQI VGEQAMALGI DRAKAHGSCI
MTLGNAHHLG RIGHFAEMAV DQGLVSLHFV NVLSRPVVAP FGGGDGRFGT NPCCIGVPLK
GREPFVLDFA TSRVAQGKMR VAHNKGIQVE PGTLIDEHGR PTTDPGVVVV PQSNGLFGAL
LAFGEHKGYG MAVACELLGG ALTGGGTWHK ATDPAVRAVV NGMLTILIDP AKLGTQAAFE
QEAVAFVDWL QAGPVAPGFD AVQIAGDPER ATRAQREVEG IAVDDQTWQE MVAAGRKVGA
TLQD