| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3891 |
|---|
| Symbol | |
|---|
| ID | 4013454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4084249 |
|---|
| End bp | 4085283 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637943542 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_550685 |
|---|
| Protein GI | 91789733 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.172057 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCGC ACACCCCTGA TCATTTGCCT GTGAGCCACT TGCCCGTGAG CCACGAAACC
GCCCAGTTGA TGGAGCAAAT CCTCTATGAG GTCAAGCGCG TGGTGGTCGG GCAGGACCGC
TTCCTCGAAC GCGTGATGGT CGCCATCCTG GCACAGGGCC ACCTGCTGGT GGAGGGCGTT
CCCGGCCTGG CCAAGACCCT CACCGTGAAA ACGCTGGCCA GCACCGTGCG CGGCAATTTC
AAGCGCATCC AGTTCACGCC TGACCTGGTG CCGGCCGACC TGGTGGGTAC GCGCATCTAC
AACCAGAAAA CCGGCGAATT CAGCACCTCG CTCGGCCCGG TCTTCACCAA CCTGCTGCTG
GCCGACGAGA TCAACCGCGC GCCAGCCAAG GTACAAAGCG CGCTGCTCGA GGTCATGCAG
GAGCGGCAAG TCACCATTGC GGGCATCACG CACAAGGTGC CCGAGCCGTT TCTGGTGATG
GCCACGCAAA ACCCGATTGA GACCGAAGGA ACCTACCCGC TGCCCGAAGC GCAGGTAGAC
CGCTTCATGA TGAAGGTGCT GGTCGACTAC CCCAGCGACG AGGAAGAGTT TGTCATCGTC
CAGCGCGTCA CCGGCCCTGC GGTGGCGGTA GCGGCCGTGG CCACCACCGA GCAGCTGGCC
GCCCTGCAGA CCGAATGCCG GCGCGTGTAT GTCGACCCCT CCCTGGTGCA GTACGCGGTG
CGGCTGGTCT CGGCCACGCG CAACCCCACC CGGCACGGGA TCAAGGACCT GGCGCGCTTC
ATCACCTTTG GCGCCAGCCC GCGCGCCACC ATCAACCTGA CCGAAGGCGC CAGGGCACTG
GCCATGCTGC GCGGCCGCAG CTACGCCCTG CCCGAAGACA TGACCGACCT GGTGCCCGAT
GTGCTGCGCC ATCGCCTGGT GCTGTCTTAC GAAGCCCTGT CAGAAGGACT TTCGGCCGAC
ACGGTGGTCA GCAAGATCAT GGCCAAAATC CCGGCACCCA CCAAGCCGCT TGCTCATGAA
AAACTCGCCG CCTAG
|
|---|
| Protein sequence | MESHTPDHLP VSHLPVSHET AQLMEQILYE VKRVVVGQDR FLERVMVAIL AQGHLLVEGV
PGLAKTLTVK TLASTVRGNF KRIQFTPDLV PADLVGTRIY NQKTGEFSTS LGPVFTNLLL
ADEINRAPAK VQSALLEVMQ ERQVTIAGIT HKVPEPFLVM ATQNPIETEG TYPLPEAQVD
RFMMKVLVDY PSDEEEFVIV QRVTGPAVAV AAVATTEQLA ALQTECRRVY VDPSLVQYAV
RLVSATRNPT RHGIKDLARF ITFGASPRAT INLTEGARAL AMLRGRSYAL PEDMTDLVPD
VLRHRLVLSY EALSEGLSAD TVVSKIMAKI PAPTKPLAHE KLAA
|
|---|
| |