| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3889 |
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| Symbol | |
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| ID | 4013452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4082221 |
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| End bp | 4083081 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637943540 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_550683 |
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| Protein GI | 91789731 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.456888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCT CCCTGCCCCG CCCGGCCTGG CTGCGCGCCG GCACGGTGGT GTATGCCCTG
GCCTTTTTCG CCTTCCTGTT CCTGCCGCTG GCGGTGGTGG CGGTGTTCGC CTTCAACGAC
GCGCCCTATC CCGCCCCGCC CTGGCGCGGC TTCACGCTGG ACTGGTTTTT TGGCAGCAAG
GCCGGCCGCA CCGGGCTGTT TTCGGACGGG CCGCTGCTGG CCAGCCTCTG GACCAGCGTG
GTGGTGGCGG GCTGGGTCAC GCTGCTGGCG GTTCTGGTGG GTACCACCAA CGCCTTTTTG
ATTGAGCGCA GCCGGTTTCC GGGCAAGCAG GCCCTGTCTT TGCTGATGCT GGCCCCGCTG
GTGATTCCGG GCGTGATTCT GGGCATCTCG ATACTGGCCT TTGCCAGCCG GATGGCGCAA
TTTGCAGACG ACATATGGGG CCTTGAGCTT GATTTTCTGC GCCCCGGCCT GCCGCTGGTG
GTGCTGGGCC AGTTTTCGTA CATCGTGTCC ATTGCCACCC TCATCATCAC GGCGCGCCTC
AAACGCTTCG ACATCACCCT GGAAGAAGCT GCTTACAACC TCGGCGCCTC GCGCGCAGCG
GTCTTTGCCA CCATCACGCT GCCGGCGCTC AAACCGGCCC TGGTAGGCGC TGCGGCCATT
TCATTTTTGA TGTCTTTTGA GAACTTCAAC ACCACGCTGA TGCTGGTGGG TTCGGACGCG
CCGCTCACCG TCATGATGTA TGGGCGCATG CGCGAAGGCG CCACCCCGGT CCTGAACGCC
GTCAGCCTGT TTCTGATGCT CGCCTCTGCC GCGCTGGCAC TCACGCTGCT GCGCAAGCCA
GCCATCGGCG GGGCAGCCTG A
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| Protein sequence | MIASLPRPAW LRAGTVVYAL AFFAFLFLPL AVVAVFAFND APYPAPPWRG FTLDWFFGSK
AGRTGLFSDG PLLASLWTSV VVAGWVTLLA VLVGTTNAFL IERSRFPGKQ ALSLLMLAPL
VIPGVILGIS ILAFASRMAQ FADDIWGLEL DFLRPGLPLV VLGQFSYIVS IATLIITARL
KRFDITLEEA AYNLGASRAA VFATITLPAL KPALVGAAAI SFLMSFENFN TTLMLVGSDA
PLTVMMYGRM REGATPVLNA VSLFLMLASA ALALTLLRKP AIGGAA
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