| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3702 |
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| Symbol | |
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| ID | 4013613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3911727 |
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| End bp | 3912227 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637943356 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_550500 |
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| Protein GI | 91789548 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.604438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGCGCA CTTCAATCAA CCGACTATTC AAGGAGCCCG ACATGAACGC ATTTTCAATT
CGCAGCTTTA TCGCCCTGCC TGTGCTGGGC CTGGCTTTCG CCGGCGCCGC CCTGGCTGCC
GACTTTCAAA CCATGCCCGT CCAGAACGTG CAGATCGACG ATTTCGCAGC CGGCAAAAAA
GCCATTGATG CCAAAAACTG GGCACAGGCC GTCAGCAGCT TCAGCAAGGT CGTCGCCAGG
AACCCCACGA ATGCCGACGC CTACAGCTAC CTCGGTTATG CCAACCGCTG GCTGGGCAAG
TACGACGAGG CCTTTGCCGC CTACGGCAAG GCGCTGGCGC TGGACCCCAG GCACAAGGGC
GCGCTGGAAT ATTCGGGCAT CGCCTACCTG AAAACCAACC AGAAAGCCCA GGCTGAAGCC
CAGTTCGCCA AGCTGCAGGC CATCTGCGCG ACCTGCGAGG AAACCAGCGA CCTGGCCAAG
GCCGTTGCAG CGGCTAAATA A
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| Protein sequence | MQRTSINRLF KEPDMNAFSI RSFIALPVLG LAFAGAALAA DFQTMPVQNV QIDDFAAGKK
AIDAKNWAQA VSSFSKVVAR NPTNADAYSY LGYANRWLGK YDEAFAAYGK ALALDPRHKG
ALEYSGIAYL KTNQKAQAEA QFAKLQAICA TCEETSDLAK AVAAAK
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