| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3622 |
|---|
| Symbol | |
|---|
| ID | 4013729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3826270 |
|---|
| End bp | 3826797 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637943281 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_550425 |
|---|
| Protein GI | 91789473 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1451] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCTG TCGGCCATCC GATGAAATAC CTCTCGGGCT ACCCTGACAG CCTCAAAGCC
CAGGTACAGC AACTCTTGGC ACAAGACCGT CTGGGCGACA TGCTGCTCAC GAAGTACCCA
CGGGCGCACG ACGTACGCAC CGACAAGGCC TTGTACGACT ACGTGATGGA CCTCAAAAAC
ACGTTTTTAC GCAATGCCGA GCCGCTCAGC AAAGTGGCTT TTGACAGCAA GCTGCACGTG
ATTGCCCACG CGCTGGGGAC GCACACGGCC ATCTCAAGGG TTCAGGGCAG CAAGCTCAAG
GCCAAACGTG AAATACGCGT GGCCACGCTA TTCAAGGAAG TGCCTGCGGA GTTCCTGAAG
ATGATTGCGG TGCACGAGCT GGCCCACATC AAGGAAAAGG CGCACGACAA AGCCTTCTAT
CAGCTCTGCA CCTATATGGA GCCGCAGTAC CACCAGTACG AATTTGATTT GCGGGTTTAT
CTCACGCACG TTGACGTGGC GGGCAAGCTG GACTGGCCAG CGGCCTAG
|
|---|
| Protein sequence | MNPVGHPMKY LSGYPDSLKA QVQQLLAQDR LGDMLLTKYP RAHDVRTDKA LYDYVMDLKN
TFLRNAEPLS KVAFDSKLHV IAHALGTHTA ISRVQGSKLK AKREIRVATL FKEVPAEFLK
MIAVHELAHI KEKAHDKAFY QLCTYMEPQY HQYEFDLRVY LTHVDVAGKL DWPAA
|
|---|
| |