| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3552 |
|---|
| Symbol | |
|---|
| ID | 4013776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3752652 |
|---|
| End bp | 3753242 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637943214 |
|---|
| Product | OmpA/MotB |
|---|
| Protein accession | YP_550358 |
|---|
| Protein GI | 91789406 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.237192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.244916 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCTC AGGACGATGA CGGCCAGCTG GGCCTGGTGT TGACGGTCGT CTTTGGCCTG
GTGGCGCTGG TGATTGCCTT GCTGATGGCC GTGGTGATCA GCTTTCGTGT TGACCCGCGC
GGCGTTCCGG CGTCTGCGCC TGCGCCTTCC GCCATCTCCG TCCCCATGGC TGTGCCCGAC
GCTGTGCCCG ACGCCACACC ACCGGATGCC CCCAGCGCGG CGCCGGCAGA TATCAGCCGC
AGCGCCGCGC AGGCGGCCGC CGATGCAGCC AGCGTCAAGG TTGAATACGG AGTCGTGAAG
TTTTACTTCG CGTCCGGCAA GGCAGACCTT GCCGCAGGCG CTGGCGACGC CATGGCTGAT
CTGGTCAAAG CCGCAAAGTC CGGCCGCAGG CTGGTCATTG CCGGGTTTCA TGATGCCACC
GGCGACGCGA CAAAAAATGC CAGTCTGGCC CGGCAGCGCG CCCTCGCGGT GCGGGACGCC
CTGAAGGCCG CGGGTGTTGC CGAGCGGCAG ATCGAGCTGA AAAAGCCCGA GCAAATGGCC
GGCAGCGGAA GCGATGCCGA CGCCCGGCGT GTCGAAATCA GCATTCAATA G
|
|---|
| Protein sequence | MFSQDDDGQL GLVLTVVFGL VALVIALLMA VVISFRVDPR GVPASAPAPS AISVPMAVPD
AVPDATPPDA PSAAPADISR SAAQAAADAA SVKVEYGVVK FYFASGKADL AAGAGDAMAD
LVKAAKSGRR LVIAGFHDAT GDATKNASLA RQRALAVRDA LKAAGVAERQ IELKKPEQMA
GSGSDADARR VEISIQ
|
|---|
| |