| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3428 |
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| Symbol | |
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| ID | 4013886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3626776 |
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| End bp | 3629973 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637943091 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_550235 |
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| Protein GI | 91789283 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGTCGC TGCTCATGCT CATCTCGGGC CTGATTGCGC TGCGCTCGCT GCCGATTGCC
GAATACCCTG ACGTGGTGCC GCCCACCGTG GTGGTGCGCG CCAACTACCC CGGCGCCAAC
CCCAAGGTGA TTGCCGAGAC CGTGGCCACG CCGCTGGAGG AAGCCATCAA CGGCGTGGAC
GGCATGCTCT ACATGAGCAG CCAGGCGACC ACCGACGGCC TGATGACGCT CAACGTCACC
TTCAAGCTCG GCACCGACCC CGACAAGGCC CAGCAGCTGG TGCAAAACCG CGTCTCGCAA
GCCGAGCCGC GCCTGCCGGA AGAAGTGCGC CGCCTCGGCA TTACCACGAT CAAGAGCTCA
CCCGACCTCA CGATGGTGGT GCACTTGCTG TCGCCCAGCG GCCGCTATGA CATGACCTAT
CTGCGCAACT ACGGGGTGCT CAATGTCAAG GACAGGCTGG CCCGCATCAA CGGCGTGGGC
CAGGTGCAGC TGTTCGGCTC GGGCGACTAC TCGATGCGCG TCTGGCTGGA CCCGCAAAAG
GTGGCCGAGC GCGGCCTGTC CGCCGGTGAC GTGGTGCGCG CCATCCGCGA GCAGAACATC
CAGGCTGCGG CCGGCGTGGT GGGTGCCTCG CCCGGATTGC CCGGCGTGGA CATGCAACTG
TCCATCAACG CCCAGGGACG CCTGCAAAGT GAAGAAGAAT TCGGCGACAT CATTGTCAAA
ACCGAAAAGG CCGAAAAAGG CGGCGCAGTC ACGCGCCTGC GCGACATCGC CCGCCTGGAA
CTGGGCGCCT CCGACTATGC GCTGCGCTCG CTGCTCGACA ACAAGCAGGC CGTGGCCGTG
CCGGTGTTCG CCGCGCCGGG CTCCAATGCC ATCCAGATTT CCGATGACGT GCAGGCCGTG
ATGAAGGACC TGAAAAAGAA CATGCCCGAA GGCGTGGACT ACGAGATCGT TTACGACACC
ACCCAGTTCG TGCGCTCGTC CATTGAAGCC GTGGTGCACA CGCTGCTCGA GGCCGTGGCC
CTGGTGGTGC TGGTCGTGAT CATCTTTTTG CAGACCTGGC GCGCTTCCAT CATTCCGCTG
CTGGCCGTGC CCATCTCGGT CATCGGCACC TTTGCGGTGA TGCATCTCTT CGGCTTTTCC
ATCAACGCGC TCAGCCTGTT CGGGCTGGTG CTGGCCATCG GTATCGTGGT GGACGACGCC
ATCGTGGTGG TCGAAAACGT GGAGCGCAAT ATCGAGGCGG GCCTGAGTCC GCGCGACGCC
ACCTACCGCG CCATGCGCGA GGTGTCGGGG CCTATCATCG CGATTGCCCT GGTGCTGATC
GCCGTGTTCG TGCCGCTGGC CTTCATCACC GGCCTGTCGG GCCAGTTCTA CAAGCAGTTC
GCGCTGACGA TTGCGATTTC CACCGTGATC TCTGCCATCA ATTCGCTGAC GCTGTCGCCA
GCGCTGGCCG CCTTGCTGCT CAAGAGCCAT GACGCACCGA AAGACGCGCT GACCCGCGGC
ATGGACAAGG TGTTCGGCCG CTTCTTTGCC GCCTTCAACA AGGCCTTTGG CCGCGGCTCT
GACAACTACA GCCGCGGTGT CAAGGGTGCG ATCTCGCGCA AGGCCGTGAT GCTGGGCGTG
TACCTGGTGC TGGTGCTGGC CACGGCAGGC CTGTTCAAGG CCGTTCCCAG CGGCTTTGTG
CCCGGGCAGG ACAAGCAGTA CCTGATCGGC TTTGCCCAGT TGCCCGACGG CGCCACGCTG
GACCGCACCG AAGACGTGAT CCGCAAGATC AGCGACATCG CCATGAAACA ACCCGGCGTG
GAACACGCGA TTGCTTTCCC CGGCCTGTCG ATCAACGGCT TCACCAACAG CTCCAACTCG
GGCATCGTGT TTCTCTCGCT CAAGCCGTTC GATGAGCGCA AGAGTGCGGA CATGAGTGCA
GGCGCCATCG CCGGCCAGCT CAACGGCAAA TTCGGAGGCA TCCAGGAAGC GTTTATCGCG
ATGTTCCCGC CGCCTCCGGT GCAGGGCCTG GGCACCACCG GCGGCTTCAA GCTGCAGCTG
GAAGACCGCG GCTCGCTCGG CTATGCCGCG CTGGACGCCG CCACCAAGGC TTTCATGGCC
AAGGCTTATC AGACGCCTGA ACTGGCGGGG CTGTTCTCCA GCTTCCAGGT CAACGTGCCG
CAGCTCTATG CCGACATCGA CCGCACCAAG GCGCGCCAAT TGGGTGTGCC GATAACCGAT
GTGTTCGACA CCATGCAGAT CTACCTGGGC AGCCTGTACG CCAACGACTT CAACAAGTTC
GGCCGCACCT ATTCCGTGCG GGTGCAGGCC GATGCGCCTT ACCGGGCCCG TGCCGAAGAC
ATCGGCCAGC TCAAGGTGCG CTCGACCACC GGCGAGATGG TGCCGCTGTC GGCGCTGATG
AAAGTCACGC CGAGCTTCGG CCCTGAACGC GCCATGCGCT ACAACGGCTT CCTGTCGGCC
GACATCAATG GCGGCGCTGC CCCCGGCTAT TCGTCGGGCC AGGCGCAGGA TGCGGTCGCG
CGCATCGCGG CCGAGACGCT GCCGCCCGGC ATCAGCTACG AGTGGACGGA TCTGACCTAC
CAGGAAATCA TTGCCGGCAA CTCGGCCATG TGGGTGTTCC CGCTGGCGCT GCTGCTGGTG
TTCCTGGTGC TGGCCGCGCA GTATGAAAGC TTGACCCTGC CGATCGCCAT CGTGCTGATC
GTGCCCATGG GCCTGCTGGC TGCCATGCTG GGGGTGAAGC TGACCGGTGG CGACAACAAC
ATCTTCACGC AGATCGGTTT GATTGTGCTG GTGGGGCTGT CGGCGAAGAA CGCCATTTTG
ATTGTGGAAT TTGCGCGCGA GCTGGAGTTT GCCGGGCGCA CGCCGCTGCA GGCTGCCATT
GAAGCCAGCC GCCTGCGCCT GCGTCCCATT CTGATGACCT CGCTGGCTTT CATCATGGGC
GTGCTGCCCC TGGTGCTGTC GACGGGCGCC GGTGCCGAAA TGCGCCATGC CATGGGCGTG
GCCGTGTTCT CGGGAATGAT TGGTGTCACG GCTTTTGGCC TGTTCCTCAC GCCGGTGTTT
TACGTGACCC TGCGCCGCCT CACGGGCAAC CGCCCGCTCA AGCTGCATGG CGAAGTGCCG
CATCTCGAGG CCTTCGCGGG CAGCGGCGGT GCCGGCGCGC ATGCCCAGCC GGCGGCGCCC
CTCAAGCATC ACGAATAA
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| Protein sequence | MLSLLMLISG LIALRSLPIA EYPDVVPPTV VVRANYPGAN PKVIAETVAT PLEEAINGVD
GMLYMSSQAT TDGLMTLNVT FKLGTDPDKA QQLVQNRVSQ AEPRLPEEVR RLGITTIKSS
PDLTMVVHLL SPSGRYDMTY LRNYGVLNVK DRLARINGVG QVQLFGSGDY SMRVWLDPQK
VAERGLSAGD VVRAIREQNI QAAAGVVGAS PGLPGVDMQL SINAQGRLQS EEEFGDIIVK
TEKAEKGGAV TRLRDIARLE LGASDYALRS LLDNKQAVAV PVFAAPGSNA IQISDDVQAV
MKDLKKNMPE GVDYEIVYDT TQFVRSSIEA VVHTLLEAVA LVVLVVIIFL QTWRASIIPL
LAVPISVIGT FAVMHLFGFS INALSLFGLV LAIGIVVDDA IVVVENVERN IEAGLSPRDA
TYRAMREVSG PIIAIALVLI AVFVPLAFIT GLSGQFYKQF ALTIAISTVI SAINSLTLSP
ALAALLLKSH DAPKDALTRG MDKVFGRFFA AFNKAFGRGS DNYSRGVKGA ISRKAVMLGV
YLVLVLATAG LFKAVPSGFV PGQDKQYLIG FAQLPDGATL DRTEDVIRKI SDIAMKQPGV
EHAIAFPGLS INGFTNSSNS GIVFLSLKPF DERKSADMSA GAIAGQLNGK FGGIQEAFIA
MFPPPPVQGL GTTGGFKLQL EDRGSLGYAA LDAATKAFMA KAYQTPELAG LFSSFQVNVP
QLYADIDRTK ARQLGVPITD VFDTMQIYLG SLYANDFNKF GRTYSVRVQA DAPYRARAED
IGQLKVRSTT GEMVPLSALM KVTPSFGPER AMRYNGFLSA DINGGAAPGY SSGQAQDAVA
RIAAETLPPG ISYEWTDLTY QEIIAGNSAM WVFPLALLLV FLVLAAQYES LTLPIAIVLI
VPMGLLAAML GVKLTGGDNN IFTQIGLIVL VGLSAKNAIL IVEFARELEF AGRTPLQAAI
EASRLRLRPI LMTSLAFIMG VLPLVLSTGA GAEMRHAMGV AVFSGMIGVT AFGLFLTPVF
YVTLRRLTGN RPLKLHGEVP HLEAFAGSGG AGAHAQPAAP LKHHE
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