Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3386 |
Symbol | |
ID | 4013961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3579585 |
End bp | 3580379 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637943050 |
Product | GntR family transcriptional regulator |
Protein accession | YP_550194 |
Protein GI | 91789242 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.020999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCTA TCAAAAATAG AGCTATTGAC GTCGACACAG CAGGGGCTGA GGGCCAAATT GGCACTGAAA GTGCACAGGT ACGGGCGCTG CTGAAGCTGC GCGAGCTGAT CCTCTCGGGC GAACTGGCCG GCGGCACCCG CATTGCCGAA CTGGCGATTG TCGAGCGCCT CGGTGTGTCG CGCACGCCGA TACGCGCGGC GCTGATGCGG CTGGAGCAGG AGGGCCTGCT CGAAGCGTTG CCCAACGGCG GTTATGCGGT CCGGACCTTT TCCGAGCGCG ACATTGCAGA CGCCATTGAG CTGCGCGGCA CGCTGGAAGG CTTGCTGGTG CGGCTGGCGG CCGAGCGGGG CGCGCCGGCG GTGGTGATGG GCGAGGCCAA AGACTGCCTC AAGCAGGTGG ATGCGGTGCT GGCCCAGCCC GCGCTGAGCG ACGAGGCTTT TTCCGCCTAT GTGGATTTGA ACGAACGCTT TCACACGCTG CTCTATGAGA TGGCCGACAG CCCGGTCACC GTGAAACAGC TGGAGCGTGT GGTCAGCCTG CCGTTTGCGT CGGCTTCGGC CTTTGTCGTG GTGCAGTCCA ACTCGCCGCA GGCGCGCGAC ATGCTGGTGG TGGCGCAGGA CCAGCACTGG CAGGTACTCG ATGCCATTGA GCGCGGCGAG GGCACGCGCG CCGAAGCCCT GATGCGCGAG CACTCGCGCC TGGCGCAGCG CAACCTGCGC CGTGCGCTGT CGGGCCAGGG CTCGGCCATG CCGGCCTCGA TGAAAGCCAT GAAGCTGATC CGCCGGCGCG GCTGA
|
Protein sequence | MSAIKNRAID VDTAGAEGQI GTESAQVRAL LKLRELILSG ELAGGTRIAE LAIVERLGVS RTPIRAALMR LEQEGLLEAL PNGGYAVRTF SERDIADAIE LRGTLEGLLV RLAAERGAPA VVMGEAKDCL KQVDAVLAQP ALSDEAFSAY VDLNERFHTL LYEMADSPVT VKQLERVVSL PFASASAFVV VQSNSPQARD MLVVAQDQHW QVLDAIERGE GTRAEALMRE HSRLAQRNLR RALSGQGSAM PASMKAMKLI RRRG
|
| |