Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3332 |
Symbol | |
ID | 4013985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3526508 |
End bp | 3527215 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637942996 |
Product | ABC transporter related |
Protein accession | YP_550140 |
Protein GI | 91789188 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.803262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC TCAGTGTCAA GAATCTTACT ACCGGCTTTG ACAAGGTCAA TGTCCTGCAT GATGTGTCGA TCGAGGTGGA GCCGGGCAAG ATCACCTGCA TTTTGGGCTC AAACGGGGCA GGAAAGAGTA CGCTGATCCG TTCGATTCTC GGTCTGACGC CTCCGCGTCA GGGTGAAATC TGGTGGGATG GGCGCAACCT TGCCGGGGAG AAAACGCACA AAATCATCGC CAGCGGCATC GCCTGCATTC CGGAAGGCCG CAAAGTCTTT CCGCGCATGA CGGTCGGGGA AAACCTGGCA CTTGGCGCTT TTCTGGAGTC ATCCCCTACT CGGATTGGGG AGCGACTGGC GCGGGTTTAC GAGATATTCC CCCGTCTGAA GGAGCGGTCG GCGCAGCTTG CCGGGACCAT GTCGGGCGGC GAGCAGGCCA TGGTGTCGAT CGGTCGCGGC CTGATGGCTG AACCCAAGCT GCTGCTGATT GATGAGCCTT CGCTTGGTTT GTCGCCTTTG TATGTGAAAG AAAACTTCAA GGTGATCAAG CAGATCAATG ATCTCGGGGT CACGGTTCTG CTGGTGGAGC AGAACGCCCG TCAGACGCTG GCGATCGCGC ACTACGGATA TGTTCTTTCG CAGGGCAAGG TCGTCGCCTC CGGTTCGGCA CAAGCGCTGT CCGAGAACGA CGAAGTGCGT TCCGCATATT TCGGCTGA
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Protein sequence | MSKLSVKNLT TGFDKVNVLH DVSIEVEPGK ITCILGSNGA GKSTLIRSIL GLTPPRQGEI WWDGRNLAGE KTHKIIASGI ACIPEGRKVF PRMTVGENLA LGAFLESSPT RIGERLARVY EIFPRLKERS AQLAGTMSGG EQAMVSIGRG LMAEPKLLLI DEPSLGLSPL YVKENFKVIK QINDLGVTVL LVEQNARQTL AIAHYGYVLS QGKVVASGSA QALSENDEVR SAYFG
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