| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3148 |
|---|
| Symbol | |
|---|
| ID | 4014189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3324386 |
|---|
| End bp | 3326416 |
|---|
| Gene Length | 2031 bp |
|---|
| Protein Length | 676 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637942815 |
|---|
| Product | transglutaminase-like |
|---|
| Protein accession | YP_549960 |
|---|
| Protein GI | 91789008 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.442197 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACCC GCCTCACCAC CCTCCCCCGC GAAGCCCGCG ACACGCTGTT CCTGCTGCTG
GTCATCGCGT GGGTGCTGCT GCCGCAGGTG GGCAACCTGC CCTTGTGGTG CAGCGCACTG
GCCGGCGCTG TGCTGGTCTG GCGCGGCTGG CTGACGCTGC AGTCCCGGCC GCTGCCGGGC
AAATGGTGGC TGGTCGGCCT GCTGGCCCTG ACCATTGCCG CCACGCTGAT GACCCACCGT
ACCCTGCTGG GACGCGACGC CGGCGTCACC CTGCTGGTCG TGTTGCTGAC GCTGAAAACC
CTGGAATTGC GCGCCCGGCG CGATGCGTTT GTGGTGTTCT TCCTCGGTTT CTTCTGCATG
CTGAGCAACT TTTTTTATTC GCAATCACTG CTCACCGCAG CCAGCATGTT GCTGGGATTG
CTGGGGCTGC TGACCGTGCT CGTCAATGCC CACATGCCGG TCGGCAAACC GCCGCTGGCG
CTGGCCGCGC GGACCGCCGG CGGGATGGTC CTGCTCGGCG CCCCTATCAT GGTGGTGCTG
TTCCTGCTGT TCCCGCGGCT GGCGCCGCTC TGGGGCGTTC CCAGCGATGC CATGACCGGC
CGCAGCGGCC TGAGTGCGAG CATGCAGGTG GGCAACATCG CCACCCTGGC GCTGGACGAC
AGCGTGGCCA TGCGCATCCG GTTTGAAGGC CGCCCGCCAC CCCAGCAGGA TTTGTATTTT
CGCGGCCCCG TGATGTCCAG CTTTGATGGC CGGGAGTGGC GACCGCCGCT GTTCAACTTC
TCCCCGCGTG GCGGCCAGGG CGGGGTGGGC AGCAATCTGT CCGTGGCGGG CGCTCCCGTC
AGCTACGAAG TCACGCTGGA GCCCACCAGC CGTCCATGGC TTTTTGTGAT GGAAGCCGCA
GCCCAGAGCC CGGTGTTGCC GGGCTATCGA AGCGTCATGC AGGCCGACCT GCAATGGACG
GTGAATCGTC CGATCACCGA CCTTGTTCGC TACAAGGCAC AGAGCTACCC AATCTTTCGG
CATGGGCCGA CGCGGCCGGT CTTCGGGTTG CGGGAGTTTG TGGCGTTGCC CCCCGGCTTC
AATCCGCGCA CCCTCGCGCT GGCCAACGAG ATACGCAGTG ACCCGCGCTA CCGAAACGCC
AGCAATGCCC AACTGGTTCA GCTCGTGCTG GATCGCCTGC GCAGCGGCTA CACCTACACC
CTGGAGCCCG GCGTGTATGG CCAGCACACG GCCGATGAAT TCTGGTTTGA CCGCAAGGAG
GGTTTTTGTG AACACATCGC ATCGGCCTTT GTGATCCTGA TGCGGGCGAT GGATATCCCC
GCGCGCATCG TGACCGGCTA CCAGGGCGGT GAATTGAACG GGGTGGATGG CTTCTGGGTG
GTGCGGCAAA GCGACGCCCA TGCCTGGGCA GAAGTCTGGC AAGAGGACCG CGGCTGGGTA
CGGGTCGACC CGACCTCGGC GGTTGCCCCC GGGCGCACCG GCGCCTTCCA GCGGCTCGCT
GCGCCCCAGG GCGTAGTGGC CCAGACACTG GGAAACATCA GCCCGACGCT GGCGGCGCAG
CTGCGCGCCA CCTGGGAAGC GGTCAACAAC GGCTGGAACC AGTGGGTGCT CAACTACACC
CAGGGCAAGC AGCTCAACCT GCTCAAGGAG ATCGGCTTTG ACTCCCCGAG CTGGGAGGAT
TTGAGCTACG TTCTGCTGGG CATCATCGTG CTGGCGGCAC TGCTGGGCGC CGCCTGGACG
CTGTGGGACC GCACCCAGCA CGACCCGTGG CTGCGCCTGC TGGCCCGCGC ACGCAGGCGG
CTCGCCAAAG CCGGTATAGA CAGCACCCCG GCCACCCCGC CGCGCCAGCT GGCGCAGCAG
GTGCTGGCAC GCTATGGCGG CGGAAGCGGC AGCCCGGGGC AGGCACTGCA CGACTGGCTG
ATGCAGCTGG AGCTGCAGCG CTACGCGGCG ACGTCTTCCG GCCAGCGCAG CCAGCGCCGG
GAAATCAGGC GCTTGCGGCA GCAATGGAGC GCGCTGGCAT GGCCTGCTTA A
|
|---|
| Protein sequence | MLTRLTTLPR EARDTLFLLL VIAWVLLPQV GNLPLWCSAL AGAVLVWRGW LTLQSRPLPG
KWWLVGLLAL TIAATLMTHR TLLGRDAGVT LLVVLLTLKT LELRARRDAF VVFFLGFFCM
LSNFFYSQSL LTAASMLLGL LGLLTVLVNA HMPVGKPPLA LAARTAGGMV LLGAPIMVVL
FLLFPRLAPL WGVPSDAMTG RSGLSASMQV GNIATLALDD SVAMRIRFEG RPPPQQDLYF
RGPVMSSFDG REWRPPLFNF SPRGGQGGVG SNLSVAGAPV SYEVTLEPTS RPWLFVMEAA
AQSPVLPGYR SVMQADLQWT VNRPITDLVR YKAQSYPIFR HGPTRPVFGL REFVALPPGF
NPRTLALANE IRSDPRYRNA SNAQLVQLVL DRLRSGYTYT LEPGVYGQHT ADEFWFDRKE
GFCEHIASAF VILMRAMDIP ARIVTGYQGG ELNGVDGFWV VRQSDAHAWA EVWQEDRGWV
RVDPTSAVAP GRTGAFQRLA APQGVVAQTL GNISPTLAAQ LRATWEAVNN GWNQWVLNYT
QGKQLNLLKE IGFDSPSWED LSYVLLGIIV LAALLGAAWT LWDRTQHDPW LRLLARARRR
LAKAGIDSTP ATPPRQLAQQ VLARYGGGSG SPGQALHDWL MQLELQRYAA TSSGQRSQRR
EIRRLRQQWS ALAWPA
|
|---|
| |