Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3082 |
Symbol | |
ID | 4014240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3250400 |
End bp | 3251077 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637942749 |
Product | ABC transporter related |
Protein accession | YP_549894 |
Protein GI | 91788942 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.102554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0615819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGATA TGCGCATGAA CGTGCAAATG GACGTGCCCC TGGACGTGGA GGGGCTGAAT GCCTTTTATG GCCCGGCCCA GGCGCTTTTC GGCATTTCCC TGCAGGTGCG GCAGCGGGAG TTCGTCGTGC TGCAGGGACT GAATGGCGCT GGAAAATCGA CGCTGCTGAA AGCCCTGATG GGTCTGGAGG TGCGCACCGA GGGCCGCATC AGTTACCAGA CGGAAACGGG CCGCGCCGAC ATCGGTCAAT GGCCGACGCA CCGGCGCGCA CGTGCCGGGC TGGGCTATGT GCCCGAAGAC CGGCGGCTTT TCACCGGCCT GACGGTTCGC GAGAACCTGG CCGTGGCGGC AGGCCGGGAC GTTGCGGCGC ACGAGGCCAG GGTGCTGGAT TTGTTCCCGG TGCTCAAGAC CATGCTGAAA CGGCCCGCTG CCCAGATGAG CGGCGGCGAG CAGCAGATGC TGGCCATTGC CCGCACGCTG ATGACCGGCC CGCGCCTGCT GCTGCTCGAT GAGCCTTGCG AAGGCATTGC ACCGGTGCTG GTCGAGTCCA TCCGCGATGC CTTGCTGGCC CTCAGGGCGG GCGGCATGCC CATGCTGGTG GTGGAGCAAA ACCAGCTGCT GGCAGCCAGT GCTGACCGGC TGGTCCGGCT GGTTGCGGGT AAAGTCAGGG GTTCGTGA
|
Protein sequence | MPDMRMNVQM DVPLDVEGLN AFYGPAQALF GISLQVRQRE FVVLQGLNGA GKSTLLKALM GLEVRTEGRI SYQTETGRAD IGQWPTHRRA RAGLGYVPED RRLFTGLTVR ENLAVAAGRD VAAHEARVLD LFPVLKTMLK RPAAQMSGGE QQMLAIARTL MTGPRLLLLD EPCEGIAPVL VESIRDALLA LRAGGMPMLV VEQNQLLAAS ADRLVRLVAG KVRGS
|
| |