Gene Bpro_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3082 
Symbol 
ID4014240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3250400 
End bp3251077 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content66% 
IMG OID637942749 
ProductABC transporter related 
Protein accessionYP_549894 
Protein GI91788942 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.102554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0615819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATA TGCGCATGAA CGTGCAAATG GACGTGCCCC TGGACGTGGA GGGGCTGAAT 
GCCTTTTATG GCCCGGCCCA GGCGCTTTTC GGCATTTCCC TGCAGGTGCG GCAGCGGGAG
TTCGTCGTGC TGCAGGGACT GAATGGCGCT GGAAAATCGA CGCTGCTGAA AGCCCTGATG
GGTCTGGAGG TGCGCACCGA GGGCCGCATC AGTTACCAGA CGGAAACGGG CCGCGCCGAC
ATCGGTCAAT GGCCGACGCA CCGGCGCGCA CGTGCCGGGC TGGGCTATGT GCCCGAAGAC
CGGCGGCTTT TCACCGGCCT GACGGTTCGC GAGAACCTGG CCGTGGCGGC AGGCCGGGAC
GTTGCGGCGC ACGAGGCCAG GGTGCTGGAT TTGTTCCCGG TGCTCAAGAC CATGCTGAAA
CGGCCCGCTG CCCAGATGAG CGGCGGCGAG CAGCAGATGC TGGCCATTGC CCGCACGCTG
ATGACCGGCC CGCGCCTGCT GCTGCTCGAT GAGCCTTGCG AAGGCATTGC ACCGGTGCTG
GTCGAGTCCA TCCGCGATGC CTTGCTGGCC CTCAGGGCGG GCGGCATGCC CATGCTGGTG
GTGGAGCAAA ACCAGCTGCT GGCAGCCAGT GCTGACCGGC TGGTCCGGCT GGTTGCGGGT
AAAGTCAGGG GTTCGTGA
 
Protein sequence
MPDMRMNVQM DVPLDVEGLN AFYGPAQALF GISLQVRQRE FVVLQGLNGA GKSTLLKALM 
GLEVRTEGRI SYQTETGRAD IGQWPTHRRA RAGLGYVPED RRLFTGLTVR ENLAVAAGRD
VAAHEARVLD LFPVLKTMLK RPAAQMSGGE QQMLAIARTL MTGPRLLLLD EPCEGIAPVL
VESIRDALLA LRAGGMPMLV VEQNQLLAAS ADRLVRLVAG KVRGS