| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2910 |
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| Symbol | alaS |
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| ID | 4014407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3069934 |
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| End bp | 3072570 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637942573 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_549722 |
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| Protein GI | 91788770 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.70978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATC CCACTTCCAC GCCCGCATTC ACCGTCGCAG ATATTCGCAA GTCTTTTCTT
GATTTCTTCG CGTCCAAGGG CCACACCGTG GTGCCGTCCA GCTCGCTGGT GCCGGGCAAC
GACCCGACGC TGATGTTCAC CAACTCGGGC ATGGTGCAGT TCAAGGACGT GTTCCTGGGC
ACCGACAAGC GCAGCTACGT GCGCGCCGCG AGTGTGCAGG CCTGCCTGCG CGCCGGCGGC
AAGCACAACG ACCTGGAAAA CGTCGGCTAC ACCGCGCGCC ACCATACCTT TTTCGAGATG
CTGGGCAACT GGAGCTTTGG CGACTACTTC AAGCGTGAGT CGCTGAAATG GGCCTGGGAA
CTGCTGACCG ACGTCTACAA ATTGCCGGCC GACAAGCTCT GGGCTACCGT CTACATCGAT
GACGACGAGG CTTACGACAT CTGGACCAAG GAGATTGGCC TGCCGCCCGA GCGCGTGGTG
CGCATCGGCG ACAACAAGGG CGCCAAGTAC GCCAGCGACA ACTTCTGGAT GATGGCCGAC
ACCGGCCCCT GCGGGCCCTG CAGCGAGATC TTTTACGACC ACGGCCCCGA GATTGCCGGC
GGCCCGCCGG GCTCGCCCGA GCAGGACGGC GACCGCTACA TCGAGATCTG GAACAACGTG
TTCATGCAGT TCGACATGCA GCCCGACGGC TCGGTCAAGC CGCTGCCTGC GCCCTGTGTG
GACACCGGCA TGGGGCTGGA GCGCCTCGCC GCCATCCTGC AGCATGTGCA CAGCAACTAT
GAGATCGATG TTTTCGATGC GCTGATCAAG GCCGCCGCCC GCGAAACGGG CGAGAAAGAC
CTGAACAACA AGTCGCTGCG CGTGATTGCC GACCACATTC GCGCCACGGC GTTTCTGGTG
AGCGACGGCG TCAACCCGTC CAACGAAGGC CGCGGTTATG TGCAGCGCCG CATCATCCGC
CGCGCGATCC GCCATGGCTA CAAGCTGGGC AAGAAGACGC CGTTTTTCCA CAAGCTGGTG
GCCGACCTGG CCAGGCTGAT GGGCGATGCC TATCCCAAAC TCAGGACCGA CGAGGCGCGC
ATCACTGCCG TTCTCAAGGC CGAGGAAGAG CGCTTCTTCG AGACGCTCGA AATCGGCATG
ACGATTCTGG ACACGGCGCT CGCCGGCGGG GCCAAGGTGT TGCCCGGCGA TGTCGCCTTC
AAGTTGCATG ACACCTATGG TTTTCCGCTG GACCTGTCGG CCGACGTTTG CCGCGAGCGG
GGCGTGGATG TGGACGAGAC CGGTTTCAAC GCCGCCATGG ACAGGCAGAA AAACCAGGCG
CGTGCCGCCG GCAAGTTCAA GATGGACCGC GCGCTGGAGT ACGCAGGCAG CGGCAATACC
TTCACTGGTT ATGAGCGCCT GGAAGAAACC GCAAAAATCG TCGCGCTCTA CGCAGACGGT
GTGCCCGTTG CTGCGCTGAC AAAAGGTCAA AGCGGCGTGG TGGTGCTGGA CACCACCCCG
TTCTACGCAG AAAGCGGCGG TCAGGTCGGC GACGAGGGCG AGCTGATCAG CGGCTCGGCG
CACTTTGCCG TGGGCGACAC GCTCAAGATC AAGTCGGACG TGTACGGTCA CCATGGTACG
GTGGAGCAGG GCACGCTGAA TGTCGGTGAC CATGTCAACG CGCGTGTCAA TCTGGCCGTG
CGCGCCGCCA CCGTGCGCAA CCACAGCGCC ACCCACCTGA TGCACAAGGC CTTGCGCGAA
GTGCTGGGCG AGCATGTGCA GCAAAAGGGC AGCCTGGTGA ATGCCGAGCG CACGCGGTTC
GACTTTGCGC ACAACGCACC CGTGACCGAC GACCAGATTC GCGAGATCGA AGCGCGCGTC
AATGCCGAGA TCCTGTCCAA CGTGGCGACC GACGCCAGCG TGATGGATAT GGAAGCGGCG
CAGAAAACCG GCGCCATGAT GTTGTTTGGC GAGAAATACG GCGACAAGGT GCGCGTGCTG
AGCATTGGCT CGAGCAAGGA GCTGTGCGGC GGCACCCACG TGACGCGTAC AGGTGACATC
GGCCTGTTCA AAATTGTGGC CGAGAGCGGC GTGGCCGCCG GGGTGCGCCG TGTCGAAGCC
GTCACCGGCG AGAACGCGCT GGCTTACCTG CAGTCGCTCG AATCCACGGT TCAGGCCGCC
GCTGGCTCGC TGAAGGCCAG CCCGACAGAA CTGCAGCAGC GTATTGGCCA GGTGCTGGAC
CAGGTCAAGT CGCTGGAGAA AGAAATTGCC GCCCTCAAAG GCAAGCTGGC GTCGTCGCAA
GGCGACGAGC TCATGGCTCA GGCCTTTGAC GTCAAGGGCC TGAAAGTGCT GGCCGCCCGG
CTGGAAGGTG CCGACGCCAG GACCTTGCGC GAAACCATGG ACAAGCTCAA GGACAAGCTG
AAGACCGGAG TCTTCGTGCT GGCTGCAGTG GATGGCAACA AGGTGCAAAT CGCCGCGGGC
GTCACCGCTG ATAGTGTGAC TGTGGTCAAG GCCGGCGAGC TCGTCAACTT TGTCGCCCAG
CAGGTGGGTG GCAAGGGCGG CGGCAAGGCC GACATGGCCA TGGCTGGCGG CACCGATGCC
TCCCGGCTGG ATGACGCGCT GAAATCGGTG CGAGCCTGGG TGACCGAGCG CGCCTGA
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| Protein sequence | MSHPTSTPAF TVADIRKSFL DFFASKGHTV VPSSSLVPGN DPTLMFTNSG MVQFKDVFLG
TDKRSYVRAA SVQACLRAGG KHNDLENVGY TARHHTFFEM LGNWSFGDYF KRESLKWAWE
LLTDVYKLPA DKLWATVYID DDEAYDIWTK EIGLPPERVV RIGDNKGAKY ASDNFWMMAD
TGPCGPCSEI FYDHGPEIAG GPPGSPEQDG DRYIEIWNNV FMQFDMQPDG SVKPLPAPCV
DTGMGLERLA AILQHVHSNY EIDVFDALIK AAARETGEKD LNNKSLRVIA DHIRATAFLV
SDGVNPSNEG RGYVQRRIIR RAIRHGYKLG KKTPFFHKLV ADLARLMGDA YPKLRTDEAR
ITAVLKAEEE RFFETLEIGM TILDTALAGG AKVLPGDVAF KLHDTYGFPL DLSADVCRER
GVDVDETGFN AAMDRQKNQA RAAGKFKMDR ALEYAGSGNT FTGYERLEET AKIVALYADG
VPVAALTKGQ SGVVVLDTTP FYAESGGQVG DEGELISGSA HFAVGDTLKI KSDVYGHHGT
VEQGTLNVGD HVNARVNLAV RAATVRNHSA THLMHKALRE VLGEHVQQKG SLVNAERTRF
DFAHNAPVTD DQIREIEARV NAEILSNVAT DASVMDMEAA QKTGAMMLFG EKYGDKVRVL
SIGSSKELCG GTHVTRTGDI GLFKIVAESG VAAGVRRVEA VTGENALAYL QSLESTVQAA
AGSLKASPTE LQQRIGQVLD QVKSLEKEIA ALKGKLASSQ GDELMAQAFD VKGLKVLAAR
LEGADARTLR ETMDKLKDKL KTGVFVLAAV DGNKVQIAAG VTADSVTVVK AGELVNFVAQ
QVGGKGGGKA DMAMAGGTDA SRLDDALKSV RAWVTERA
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