Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2835 |
Symbol | pdxA |
ID | 4014485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2988565 |
End bp | 2989614 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637942498 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_549648 |
Protein GI | 91788696 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0815578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.293951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC AAACCACACC GGCAACTACA CCGGCAGCCA CACCGGTCAT TGCCCTGACG TTGGGCGATG CTGCAGGCAT CGGCCCCGAG CTGATTGCGC GGCTGCTGAG CCAGCCCGGC ATCACCGCCA ACGCCAATAT CGTGCTGGTC GGCGACCCCT GGCTCTGGCA GGACGGCCAG GCCATTGCCA AACTCACCGT GCCCACGCAG GCCGTTGCCA GCCTGGCCGA GGTGCGAAAA CGCCCCGCCC AGCGCCTACC AGCCTTCCTT GCCGTCGACA CCATTCGCCC GGAGCAGGTG CAGCGCAGCC AGGCGCAGGC CGCTTGCGGC AGCGCGGTGC TGCGGGTGCT CAACCTGTGC ATGGACGGCG CCAAGCGCGG CGAGGTCGAC GCCATTTGCT TTGCCCCGCT GAACAAGCAG GCGATGAAGC TGGGCGGCCT GAAGCACGAG GACGAACTGC ACCACTTTGC CGAATATCTG GGCGTGACCG GCTACTTCTG CGAGTTCAAC ACCCTCGGCG ACTTGTGGAC CTCGCGCGTG TCCTCGCACA TCCCGCTGAA GGACGCGGCG TCCATGCTCA GCAAGGAGCG CATCGTGGAT GCCGCCCGCC TGATTTACCG GTCGCTGCAG GCCAGCGGCA CCGCCAGCCC CAAAGTGGCG ATTGCGGCCT TCAACCCGCA CGGCGGGGAT GGTGGTATGT GCGGACGCGA AGAGATTGAC ATCATCGAGC CGGCCGTGCG CGAGTTGCGC GCCAGCGGCT TTCCGGTCGA TGGCCCCTTC CCCGCCGACA CCATCTTTCT CAAGGCGCGC GATGGTCAGT ACCAGGCCAT CGTCACCATG TACCACGACC AAGGGCAGAT TGCCATCAAG CTCATGGGCT TCAGCAAGGG CGTGACGGTG CAAGGCGGCT TGCCGGTGCC CATCACCACG CCGGCACACG GCACGGCTTA TGACATTGCG GGTCAGGGTG TGGCCGATGT GAATGCCACG CTCAACGCCT TTCAGATTGC CCAGCGCATG GGTACCGCCC GGCGGGAGCA GACTGCTTGA
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Protein sequence | MSQQTTPATT PAATPVIALT LGDAAGIGPE LIARLLSQPG ITANANIVLV GDPWLWQDGQ AIAKLTVPTQ AVASLAEVRK RPAQRLPAFL AVDTIRPEQV QRSQAQAACG SAVLRVLNLC MDGAKRGEVD AICFAPLNKQ AMKLGGLKHE DELHHFAEYL GVTGYFCEFN TLGDLWTSRV SSHIPLKDAA SMLSKERIVD AARLIYRSLQ ASGTASPKVA IAAFNPHGGD GGMCGREEID IIEPAVRELR ASGFPVDGPF PADTIFLKAR DGQYQAIVTM YHDQGQIAIK LMGFSKGVTV QGGLPVPITT PAHGTAYDIA GQGVADVNAT LNAFQIAQRM GTARREQTA
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