| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2798 |
|---|
| Symbol | |
|---|
| ID | 4014526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2939146 |
|---|
| End bp | 2939979 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637942462 |
|---|
| Product | transport-associated |
|---|
| Protein accession | YP_549612 |
|---|
| Protein GI | 91788660 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.549341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.297998 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTAA TCGCCATGAC CCAGGAGATG GGCTCCCTCG CCAAGGACGT CTCCCTGCAG
CTTGCCCAGA CAGCCAATCT GGCTGTGATG CGCCATGAGG TGCAGGAACA TGTGGCCGAT
CGGATGCACG TGCCCAGCAG CCTGATCAGC CGGCTGCGCG AAGGCAAGGC CGGCCTGGTC
GAGCGCCTGA CCACGGACAA GGAGCGGGTG GCGGTGTACA CGGCGCAGGA AGTTTTTGCG
CTGGCCGATC AGGGCAATAT CGTGCTGCGC GGCTGGGGAG CGACCTGCCT GTTGCGTCCG
GTTCCGCATG TGGTGCGAGT GCGGGTAACC CGCCCGTTCA GGAAGCGCGT GGCGTGGCTG
ATGGACCATC TGGGAACAGA CGACGAGGCG TTCGCCGAAG CCGAGGTCCA TCGCAGCGAC
AGCGCCCACG CTTCCCGGAT GCACGAACAG TTCGGCGTGA CCTGGGGTGA CCCGCTGCTC
TACGATCTGG TACTCAACAC CGATCGTGTG TCCGTGGACA GCTGCGTGGC CCAGATCCAG
CATCTGGCCA GCCGGCCGGA ATTCCAGGAA ACCGCGGCGT CAAAGGCAAT GCTGGCAAAC
CTGGCGCTCA ACGCGCGCGT CCGCGCGGCA CTGAAAGACC AGGAATCGAC CCGCGATATC
AACATCAGCA TCGATTCCGA CGCAGGCCAG ATGGTCCTCA GCGGGATCGT CCTGAACGCG
CAGGAAAGCG CGGAAGCGGC CAGGGTCGCC GGCACGGTGC CCGGCGTCAC CCGCGTTGAC
AACCAGTTGC GCCTGATGGC CACAACCCGG CGTTTCGCTG CAGCCAAGCA CTGA
|
|---|
| Protein sequence | MPVIAMTQEM GSLAKDVSLQ LAQTANLAVM RHEVQEHVAD RMHVPSSLIS RLREGKAGLV
ERLTTDKERV AVYTAQEVFA LADQGNIVLR GWGATCLLRP VPHVVRVRVT RPFRKRVAWL
MDHLGTDDEA FAEAEVHRSD SAHASRMHEQ FGVTWGDPLL YDLVLNTDRV SVDSCVAQIQ
HLASRPEFQE TAASKAMLAN LALNARVRAA LKDQESTRDI NISIDSDAGQ MVLSGIVLNA
QESAEAARVA GTVPGVTRVD NQLRLMATTR RFAAAKH
|
|---|
| |