| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2737 |
|---|
| Symbol | |
|---|
| ID | 4014619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2879902 |
|---|
| End bp | 2880498 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637942401 |
|---|
| Product | 3'-5' exonuclease |
|---|
| Protein accession | YP_549551 |
|---|
| Protein GI | 91788599 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0349] Ribonuclease D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.196603 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC ATTTCGTAAC ACCTGGTAAA GATCAAATTG CGCTCCTGGA GCCTTTCGAG
CGGCTGGGGC TGGCGCAGGT ACAGGTGGTT TCAACGCCGC AGCAGGCCGG CAAGGCGCTG
GAGGAACTCG CAGGCACCGC GGCCCTCGGG TTCGATACCG AATCCAGACC GACCTTTGCC
AAAAACGAGG CATCCGACGG ACCGCACATC GTCCAGCTGT CCACACTGGA GAAGGCCTAT
ATCTTTCAAT TGCAGGATGC GGACTGCCGC CGCGCCGTGG CCATGCTGAT GGAGTCGCCG
GCCATCATCA AGGCCGGCTT CGGCCTGGGG GACGACCGCC GGCGTCTCAT CAGCAAATTC
GGCGTTGACC CGCAGGGTGT GCTGGACCTG AACACCGTGT TCAGGAAAAA AGGCTACCGC
AAGGACATGG GCGTGCGCGG GGCCGTGGCC GTGGTTTTCA ACAAGCGGTT CATCAAATCC
AGAAAAGCCA CCACCTCCAA CTGGGCCAAC AGCAAGCTGT CCGACGCGCA GATCATCTAC
GCCGCCAATG ACGCCTATGC TGCGCTCAGG GTCTTCATGG CGCTTGAGCT GGACTGA
|
|---|
| Protein sequence | MTEHFVTPGK DQIALLEPFE RLGLAQVQVV STPQQAGKAL EELAGTAALG FDTESRPTFA
KNEASDGPHI VQLSTLEKAY IFQLQDADCR RAVAMLMESP AIIKAGFGLG DDRRRLISKF
GVDPQGVLDL NTVFRKKGYR KDMGVRGAVA VVFNKRFIKS RKATTSNWAN SKLSDAQIIY
AANDAYAALR VFMALELD
|
|---|
| |