| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2624 |
|---|
| Symbol | sucA |
|---|
| ID | 4014734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2755702 |
|---|
| End bp | 2758593 |
|---|
| Gene Length | 2892 bp |
|---|
| Protein Length | 963 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637942286 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_549438 |
|---|
| Protein GI | 91788486 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.844376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCCA GCTCGCAGAC ACCTGCATCT GTCTATTCTG CCTATAACGG CAACACTTAT
CTTTTCGGCG GCAATGCGCC CTATGTCGAA GAGATGTACG AAAACTATCT TGCCAATCCT
GGCAGCGTGC CCGATAACTG GCGCGATTAC TTCGACGCAC TCCAGCATGT TCCCGCCGTG
GATGGCAGCA ATGCCAAAGA CGTGCCGCAC CTGCCCGTCG TCAACGCCTT TGCCGAGCGT
GCCAAACAGG GCCAGACCAA AGTCGGGGAG GCCAGCGGTG CCGACTCAGA AATGGGGCGC
AAGCGCACGG CCACCCAGCA ACTGATTGCC GCGTACCGCA ACGTCGGTGC CCGCTGGGCT
GATCTCGACC CCCTGAAGCG CGCCGAGCGC GACAAGATTC CCGAGCTGGA GCCGTCTTTC
TACGGCTTCA CCGATGCCGA CCAGGAAACG GTGTTCAACA CCAGCAACAC CTTCTTCGGC
AAAGACACCA TGAGCTTGCG TGAGCTGATC AACGCGCTGC GCGAGACCTA TTGCGGCACG
ATCGGCGCCG AGTACATGTA TGCCACCGAC CAGAACCAGA AGCGCTGGTG GCAGCAAAAG
CTGGAATCGA TTCGCAGCAA GCCCAATCTC ACAAAAGAGA AAAAACTCCA CATCCTTGAC
CGGCTCACCG CAGCGGAAGG CCTTGAGCGC TTTTTGCACA CCAAATACGT GGGCCAGAAG
CGCTTCTCGC TCGAAGGCGG CGAAAGCTTC ATCGCCAGCA TGGATGAATT GATCCAGCAG
GGTGGCATCA AGGGTGTGCA GGAAATTGTC ATCGGCATGG CCCACCGGGG CCGCCTCAAT
GTGCTGGTCA ACTCGCTGGG CAAAGTGCCG GCTGACCTGT TTGCCGAGTT TGACCATACC
GCCCCTGAAG ATCTGCCCAG CGGTGACGTG AAATACCACC AGGGTTTCAG CTCCGACGTG
ACCACCCCTG GTGGCCCGGT GCATCTGAGC CTGGCATTCA ACCCTTCGCA CCTGGAAATC
GTGAACCCCG TGGTGGAGGG TTCGGTGCGT GCCCGCATGG ACCGCCGTGC CGATCCGAAA
GGACTGCAGG TGTTGCCGGT TCTGGTGCAT GGTGACGCCG CCTTTGCAGG GCAGGGCGTT
GTGATGGAGA CGCTGGCACT GGCCGAAACC CGCGGTTATT TCACGGGCGG CACGGTGCAC
ATCGTGATCA ACAACCAGAT CGGCTTTACC ACCAGCGACC CGCGTGACAG CCGTTCCACG
CTGTACTGCA CCGATGTGGT CAAGATGATT GAAGCGCCGG TGCTGCACGT CAATGGCGAT
GACCCGGAGG CCGTGGTGCT GGCTACCCAG CTGGCGCTTG AGTTCCGCAT GGAATTCCAG
AAAGATGTCG TCGTGGACAT CATCTGCTTC CGCAAACTGG GCCACAACGA GCAGGACACG
CCTGCACTGA CCCAGCCACT GATGTACAAG AAGATTGCGC AGCACCCTGG AACCCGCCGC
CTGTATGCCG ACAAGCTGTC TGCACAGGGC ATGGGCGACA CGCTGGGCGA CGACATGGTC
AAGGCCACCC GCGCAGCGCT GGACGCCGGC AAGAGCACGT TTGACCCAGT GCTGACCAAT
TTCAAGAGCA AGTATGCGGT TGACTGGGTT CCCTATCTGG GCAAAAAGTG GACCGACGCG
GGGGACACCG CCATTCCCAT GGCCGAATGG AAACGCCTGG CCGACAGAAT CACCGCCATC
CCTTCCAGCG TGACACCGCA CCAGCTCGTC AAGAAGGTGT ATGACGACCG CGCAGCCATG
GGCCGCGGTG ACATCCCCGT GGACTGGGGC ATGGGCGAGC ACATGGCGTT TGCCTCGCTG
GTGGCCAGCG GCTACCCGGT GCGCCTGTCG GGTGAAGACT GCGGTCGCGG AACCTTCACC
CATCGCCATG CCGTGATTCA CGACCAGAGC CGTGAAAAAT GGGATACCGG CACCTACGTG
CCGCTGCAGA ATGTGGCTGA GAACCAGGCC CCGTTTGTGG TGATCGACTC CATCCTCTCG
GAAGAAGCGG TGCTGGCCTT CGAGTACGGC TATGCCTCCA ACGATCCCAA TACGCTGGTG
ATCTGGGAAG CGCAGTTCGG CGACTTCGCC AATGGTGCGC AGGTCGTGAT TGACCAGTTC
ATCGCTTCCG GTGAGGTGAA GTGGGGCCGC GTCAACGGCA TCACGCTGAT GCTGCCGCAT
GGCTACGAAG GCCAGGGGCC CGAGCACAGC TCGGCACGCC TGGAGCGCTT CATGCAGCTG
TCTGCCGATA CCAATATGCA GGTGGTTCAG CCGACGACCG CCAGCCAGAT CTTCCACGTG
CTGCGCCGCC AGATGGTGCG CAACCTGCGC AAACCTCTGG TGATCATGAC GCCCAAGTCG
CTGCTGCGCA ACAAGGACGC CACGTCGCCG CTGTCCGAGT TCACCAAAGG CAGCTTCCAG
ACCATCATTC CCGAGAACAA GGAAGAGATC ATCAAGAAGG CCGACAAGGT CAAGCGCATC
ATTGCCTGCT CTGGCAAGGT GTACTACGAC CTGGCTAAGA AGCGCGAAGA AAAGGGCGCT
GACGATGTGG TGATTTTGCG TGTTGAGCAG CTCTACCCCT TCCCGCACAA GGCGTTTGCG
GCGGAGCTGA AAAAGTACCC GAATGTCACC GACCTTGTGT GGTGCCAGGA CGAGCCGCAA
AACCAGGGCG CCTGGTTCTT TGTGCAGCAT TACATCCACG AGAACATGTT CGAAGGCCAG
AAGCTCGGCT ACTCAGGCCG TGCAGCCTCG GCGTCACCGG CCTCCGGGTA TTCGTACCTG
CATCAGGAGC AGCAAAAAGC GCTGGTGGAC GGCGCGTTTG GCAAGCTCAA GGGCTTTGTG
CTGACCAAGT AA
|
|---|
| Protein sequence | MSSSSQTPAS VYSAYNGNTY LFGGNAPYVE EMYENYLANP GSVPDNWRDY FDALQHVPAV
DGSNAKDVPH LPVVNAFAER AKQGQTKVGE ASGADSEMGR KRTATQQLIA AYRNVGARWA
DLDPLKRAER DKIPELEPSF YGFTDADQET VFNTSNTFFG KDTMSLRELI NALRETYCGT
IGAEYMYATD QNQKRWWQQK LESIRSKPNL TKEKKLHILD RLTAAEGLER FLHTKYVGQK
RFSLEGGESF IASMDELIQQ GGIKGVQEIV IGMAHRGRLN VLVNSLGKVP ADLFAEFDHT
APEDLPSGDV KYHQGFSSDV TTPGGPVHLS LAFNPSHLEI VNPVVEGSVR ARMDRRADPK
GLQVLPVLVH GDAAFAGQGV VMETLALAET RGYFTGGTVH IVINNQIGFT TSDPRDSRST
LYCTDVVKMI EAPVLHVNGD DPEAVVLATQ LALEFRMEFQ KDVVVDIICF RKLGHNEQDT
PALTQPLMYK KIAQHPGTRR LYADKLSAQG MGDTLGDDMV KATRAALDAG KSTFDPVLTN
FKSKYAVDWV PYLGKKWTDA GDTAIPMAEW KRLADRITAI PSSVTPHQLV KKVYDDRAAM
GRGDIPVDWG MGEHMAFASL VASGYPVRLS GEDCGRGTFT HRHAVIHDQS REKWDTGTYV
PLQNVAENQA PFVVIDSILS EEAVLAFEYG YASNDPNTLV IWEAQFGDFA NGAQVVIDQF
IASGEVKWGR VNGITLMLPH GYEGQGPEHS SARLERFMQL SADTNMQVVQ PTTASQIFHV
LRRQMVRNLR KPLVIMTPKS LLRNKDATSP LSEFTKGSFQ TIIPENKEEI IKKADKVKRI
IACSGKVYYD LAKKREEKGA DDVVILRVEQ LYPFPHKAFA AELKKYPNVT DLVWCQDEPQ
NQGAWFFVQH YIHENMFEGQ KLGYSGRAAS ASPASGYSYL HQEQQKALVD GAFGKLKGFV
LTK
|
|---|
| |