| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2610 |
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| Symbol | |
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| ID | 4014720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2740887 |
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| End bp | 2741696 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637942272 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_549424 |
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| Protein GI | 91788472 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.104861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.938997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTTTT CCGGCAATGT GATCTGCATG TCAGCCTGCT GGGTGGCTGT GTTACTGGCA
GGGTGTGCCG GCCAGCAAGG AATGTCCGGG CCCTCCGGTA ACCGGAGCGA CATCGTTACC
GAGTCGGATG AACCCGACCA TCGCAGGCGT GCACGCCTGC GGCTTGAGTT GGCCACCGGT
TATTTTGAAC AGGGCCAGCC CAATGTTGCG CTGGATGAAA TCAAGCAATC GCTTGCCATA
GACCCCACTT TTGTAGATGC CTACAACGTG CGCGGGCTGG TGTATATGCG GCTCAATGAC
ATTCCATTGG CCGAAGACAG TTTTCGCCGT GCGCTCGCGC TGAACCCCCG CGATGGCGAT
GTGGCGCACA ACTACGGGTG GCTGCTTTGC CAGCAGGCCC GCTATGAAGA TTCTTTCAGA
TCCTTTGCCC AGGCCGTTGC CAATCCGACC TACGGCGGCA AGGCCAAAAC ATTGATGGCG
CAAGGTGTCT GCCAGGTTCG CGCGGGGCAG CGTGCCGAGG CGGAACAGAG CCTGATGCAG
TCCTATGAGC TGGATGCCGG CAATCCAGTG ACCGGCTACA ACCTCGCGAC CCTTCTTTAT
GAACGTGGTG ATCTGACTCG GGCGCAGTTC TATATACGCC GTCTGAACAA CAGCGAGCTC
GCAAATGCCG AAACGCTCTG GCTGGGCATC AAGACCGAAC GGAAACTGAA TAATCGCGAG
GCAGTGCTGC AGTTGGCCGA TCAGCTGAAA AAGCGCTTTG CCCAGTCTCC CCAAGCTGCC
GCCTACGAAA AAGGTGCTTT CAATGAGTAA
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| Protein sequence | MRFSGNVICM SACWVAVLLA GCAGQQGMSG PSGNRSDIVT ESDEPDHRRR ARLRLELATG
YFEQGQPNVA LDEIKQSLAI DPTFVDAYNV RGLVYMRLND IPLAEDSFRR ALALNPRDGD
VAHNYGWLLC QQARYEDSFR SFAQAVANPT YGGKAKTLMA QGVCQVRAGQ RAEAEQSLMQ
SYELDAGNPV TGYNLATLLY ERGDLTRAQF YIRRLNNSEL ANAETLWLGI KTERKLNNRE
AVLQLADQLK KRFAQSPQAA AYEKGAFNE
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