| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2608 |
|---|
| Symbol | ispG |
|---|
| ID | 4014718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2738568 |
|---|
| End bp | 2739842 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637942270 |
|---|
| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
|---|
| Protein accession | YP_549422 |
|---|
| Protein GI | 91788470 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.720606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.924862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCCTT GCCTTCCCAT CGAGTCGGCT TTTCCGAAAG CACGGCGTTC TACCCAGGCG
CTGGTTGCCT GGGGCTCCCG CGTGGTTACC GTGGGCGGCG ACGCGCCGGT GCGTATCCAG
TCCATGACCA ACACGGACAC CGTGGATGCC ATTGGTACAG CCATTCAGGT CAAGGAGCTT
GCGCTGGCTG GCTCCGAAAT GGTTCGCATC ACCGTGAACA CGCCTGAGGC GGCGCAGGCC
GTGCCTCACG TTCGGGAGCA GCTGGATCGC ATGGGCATCG ACGTGCCGCT GATTGGTGAC
TTTCATTACA ACGGTCACCG CCTGCTGACG GATTACCCGG CCTGTGCCGA GGCCTTGTCC
AAATACCGCA TCAACCCGGG TAACGTGGGC AAGGGCGACA AGCGCGACCG GCAATTCGGC
CAGATGATTG AAGTCGCCAT GCGCTGGAAC AAGCCCGTGC GCATCGGGGT GAACTGGGGC
AGCCTTGACC AGGAACTGCT GGCCAGCTTG ATGGACGACA ACAGTGCGCG TGCCACCCCG
TGGGATGCCA GGCAGGTCAT GTATGAGGCG CTGATCACCT CGGCCATTGA TTCCGCCCGC
CGTGCCGAGG AAATGGGCAT GCGGCGTAAC CAGATCATCC TGTCCTGCAA GGTGAGCGGT
GTCCAGGATC TCATTTCCGT GTACCGCGAA TTGGCCAAAC GCAGCGACTA CGCCCTTCAC
CTCGGCCTCA CCGAGGCCGG CATGGGCACC AAAGGCACGG TCGCCTCCGC CACCGCGCTG
TCGATTTTGC TGCAGGAAGG CATTGGCGAC ACGATTCGCG TCTCCCTGAC CCCCCAGCCC
GGCGAGGCCC GCACCCAGGA AGTGGTGATT GCTTCGGAGA TCATCCAGGC CCTGGGGCTG
CGCAACTTCG TCCCCAGCGT CACCGCCTGT CCCGGCTGTG GCCGCACCAC CAGCACCACC
TTTCAGGAGC TTGCCAAGCA GATTGACGAC TTCCTGCGGG CCCAGATGCC GGTCTGGCGC
GCGCAGTACC CGGGCGTTGA AGCGCTCAAG GTCGCGGTGA TGGGCTGTAT CGTCAATGGC
CCCGGTGAAA GCAAGCATGC CGATATCGGC ATCAGTCTGC CTGGATCGGG CGAGGCGCCG
GCCGCACCGG TATTTATTGA TGGCGAGAAG AAGCTGACCC TGCGCGGAGA CAACATTGCG
CAGGAGTTCC AGGTCATCGT TGAAAACTAC ATTGAAAAAC GCTTTGGCAC GCAGTCCGTC
GCCGAAGCCG CGTGA
|
|---|
| Protein sequence | MEPCLPIESA FPKARRSTQA LVAWGSRVVT VGGDAPVRIQ SMTNTDTVDA IGTAIQVKEL
ALAGSEMVRI TVNTPEAAQA VPHVREQLDR MGIDVPLIGD FHYNGHRLLT DYPACAEALS
KYRINPGNVG KGDKRDRQFG QMIEVAMRWN KPVRIGVNWG SLDQELLASL MDDNSARATP
WDARQVMYEA LITSAIDSAR RAEEMGMRRN QIILSCKVSG VQDLISVYRE LAKRSDYALH
LGLTEAGMGT KGTVASATAL SILLQEGIGD TIRVSLTPQP GEARTQEVVI ASEIIQALGL
RNFVPSVTAC PGCGRTTSTT FQELAKQIDD FLRAQMPVWR AQYPGVEALK VAVMGCIVNG
PGESKHADIG ISLPGSGEAP AAPVFIDGEK KLTLRGDNIA QEFQVIVENY IEKRFGTQSV
AEAA
|
|---|
| |