| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2439 |
|---|
| Symbol | |
|---|
| ID | 4014900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2541810 |
|---|
| End bp | 2542352 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637942104 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_549256 |
|---|
| Protein GI | 91788304 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.911214 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCA AACTAGCTTC AAAAACCCTG ATTTTGGCGC TCGCCGGCGC ATCATTTGCC
GTCACGGCGT TTGCCCAATG GCAATGGATC GACAAGGACG GCCGCAAAGT CTTCAGCGAC
CGCTCGCCGC CAGCCGATAT CAAGGAAAAA GATATCCTGA AACGACCTGG TGGCACCCGG
ATTGCCGCCA CCGTGGCGCC TGCGGCCACG GCCGAGGCGG CCGTGTCGCC TGCGGCGGCA
GCGTCAGCGT CAGCGGCGGG CAAGGCCGGC GCTCCCAAAC TGTCGGGCAA GGATGCTCAG
CTGGAGGCCA GGAAAAAGCA GGCGGAAGAC GAAGTAGCCG CCAAAAAGAA GGCTGACGAG
GAAAAAGTGG CCAAGGCCAA GGCCGAAAAC TGCGACCGGG CCAAGCGCGG CCTGCTGACC
TTCGAGTCCG GTGTGCGGGT GTCCACCACC AATTCGAAAG GCGAGCGCGA ATTCATGGAT
GACAATGCGC GCGCTGCTGA AACCAAACGG TTGCGGGATA TCACCGCCGC CGATTGCAAA
TAA
|
|---|
| Protein sequence | MDLKLASKTL ILALAGASFA VTAFAQWQWI DKDGRKVFSD RSPPADIKEK DILKRPGGTR
IAATVAPAAT AEAAVSPAAA ASASAAGKAG APKLSGKDAQ LEARKKQAED EVAAKKKADE
EKVAKAKAEN CDRAKRGLLT FESGVRVSTT NSKGEREFMD DNARAAETKR LRDITAADCK
|
|---|
| |