Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2352 |
Symbol | |
ID | 4015005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2449487 |
End bp | 2450695 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637942018 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_549171 |
Protein GI | 91788219 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0528822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACA ATCCAGCTTC AACCCCGCCC CAGCCCCTGG CCGGCTTGCG CGTCGTCGAA TTCACCCACA TGGTCATGGG CCCCACCTGC GGCATGGTGC TAGCCGACAT GGGGGCCGAG GTCATCAAGG TCGAGCCGAT CGACGGCGAC CGCACCCGCC GCCTGCTGGG CGCCGGCTCG GGATTTTTCC CGCTGTTCAA CCGCAACAAA AAAAGCATAG GCATTGATTT ACACGATGCC GCGGGCGTGG AAGTGGCGCG CAAGCTCTGC GCCAGCGCCG ATGTGGTGGC CGAAAACTTC AAGCCCGGCA CCATGGCCAA ATACGGGCTC GACTACGCCA CCTTGAGCGC CGCCAATCCA CGCGTTATTT ACGTCAGCCA CAAGGGGTTT TTGCCCGGCC CCTACGACCA CCGCACCGCG CTGGACGAGG TGGTGCAGAT GATGGGCGGC CTGGCCTACA TGACCGGCCG CCCCGGCGAC CCGCTGCGCG CCGGCACCAG CGTGAACGAC ATCATGGGCG GCCTGTTTGG CGCCATCGGT GCGCTGGGCG CGCTGATCCA GCGCGGCATC AGCGGCAAGG GCATGGAAGT TCAGTCGGCG CTGTATGAAA ACAATGTGTT CCTGATGGGC CAGCACATGT TGCAGTACGC CATGACCGGC AAACACCCTG CCCCCATGCC CGCCCGCGAC AACCCCTGGG CGGTGTACGA CGTCTTCACG GTGAAAGACG GCGAGCAGAT ATTCCTGGCC GCCGTGAGTG ACGCGCAGTG GCAGACCTTT TGCACCGTGC TGGGTTTTGA CGACCTGAAG TGCGATGCCG CAATGGTGAC CAACAACCAG CGCGTTGAGG TGCGCCCGGC GCTGCTCAAG GATTTGGCCG CACGGCTGGC CCCGCGCAGC GCCGCCGAGC TCTCAAGTCT GATGGAAAAA GCCGGCCTGC CCTTTGCGCC GATTCGCCGG CCCGAGGACC TGTTCGACGA CGAGCACCTG CTGGCCACCG GGGGCCTGGC CGATGTGCGC CTGCCCGACG GCCCGAAAGC CGGGCAGACC GTTAAAACTA CCCTTTTTCC CATCACCATG CAGGGCCAGC GCCTGGGCGT GCGCCTGCAC CCGCCCACCT TGGGCGAACA CACGCAGGAA CTGCTCTCGG GACTGGGCTA CAGCACCAGC GCCATCGAGA ATTTGCATTC GCAGGCGGCC GTGAGCTGA
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Protein sequence | MQNNPASTPP QPLAGLRVVE FTHMVMGPTC GMVLADMGAE VIKVEPIDGD RTRRLLGAGS GFFPLFNRNK KSIGIDLHDA AGVEVARKLC ASADVVAENF KPGTMAKYGL DYATLSAANP RVIYVSHKGF LPGPYDHRTA LDEVVQMMGG LAYMTGRPGD PLRAGTSVND IMGGLFGAIG ALGALIQRGI SGKGMEVQSA LYENNVFLMG QHMLQYAMTG KHPAPMPARD NPWAVYDVFT VKDGEQIFLA AVSDAQWQTF CTVLGFDDLK CDAAMVTNNQ RVEVRPALLK DLAARLAPRS AAELSSLMEK AGLPFAPIRR PEDLFDDEHL LATGGLADVR LPDGPKAGQT VKTTLFPITM QGQRLGVRLH PPTLGEHTQE LLSGLGYSTS AIENLHSQAA VS
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