| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2018 |
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| Symbol | |
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| ID | 4015349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2088795 |
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| End bp | 2089685 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637941686 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_548846 |
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| Protein GI | 91787894 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.971404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTCA AGTCCACGCC GTTGCCGGAA GGTCTGGCCA CAACGAACGC AAGCACGGGT
ACCGCGCGCA AGGCGGGCGT CGACCATTAC GAGAACTTCC CGGTCGCTTC CGTCCTGTGC
CCACCGCACC TGCGCCCCGC CATCGCGGCC ATCTACTGGT TCGCCCGCAC CGCAGACGAC
ATCGCCGACG AGGGCGATGC CCCGCCCCAG ACCCGTCTGG ACGATCTGGC CGCCTACCAT
GCCGACCTGA TGGCGACCGC CGCCGGTCTC TCACCCTCCC CGCGCTGGGC CGCCGTGTTT
GATCGCCTGG GTCCGGTGAT CACGCAATTT GTCCTGCCGG TGCATTTGCT GGCCGACCTG
CTCAGCGCCT TTGAGCAGGA CGTGGTGAAG CAGCGCTATG CCAGCCAGGC CGAACTGCTC
GACTACTGCA GCCGCTCAGC CAACCCGGTG GGCCGTTTGC TGCTGCATCT TTATGGTGTG
CACGACGAAA GCTCGCTGCA AATGAGCGAC TGCATCTGCA GCGCCCTGCA GCTCATCAAC
TTCTGGCAGG ACCTGAGCGT GGACATTCCG CGCGGACGCA TCTACCTGCC GGCCGATGCC
TGGGCGCGCC ACGGCGTCGG CGAGGCGCAA CTGCTGGCGC TGGACAGCAA CCCGGGAACT
ACCAATTTGA TAGCAGATTG CGCCCAATCC GCAAGGGCTG CCATGCTCAA AGGCTCCCCG
CTGGTGAAAA GGATACCGGG ACGCGGCGGC TGGGAACTGC GGATGGTGGT GCAAGGCGGC
CTGCGCATCC TGGACAAAAT TGAAGCGCTG AAGTTCAATA CCCTGGCGCA GCGCCCCAAA
CTCGGGCCCT GGGATGTGGT GGTGATGGGA TGGCGCGCAC TGTGGATGTG A
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| Protein sequence | MPVKSTPLPE GLATTNASTG TARKAGVDHY ENFPVASVLC PPHLRPAIAA IYWFARTADD
IADEGDAPPQ TRLDDLAAYH ADLMATAAGL SPSPRWAAVF DRLGPVITQF VLPVHLLADL
LSAFEQDVVK QRYASQAELL DYCSRSANPV GRLLLHLYGV HDESSLQMSD CICSALQLIN
FWQDLSVDIP RGRIYLPADA WARHGVGEAQ LLALDSNPGT TNLIADCAQS ARAAMLKGSP
LVKRIPGRGG WELRMVVQGG LRILDKIEAL KFNTLAQRPK LGPWDVVVMG WRALWM
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