| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2004 |
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| Symbol | |
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| ID | 4015335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2072817 |
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| End bp | 2073833 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637941672 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_548832 |
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| Protein GI | 91787880 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.373091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA AGTTCGCATT GAGCGCATTG AGCGCCTTGA GCACATCGGG CGCCGCGAGT
GTCGCAAGTA TTGGAATTGC GATGATCGCT GCCCTGATGT CTGCGCCGGC ATTTGCCCAG
CAGAAGTTTG TCACCATAGG CACCGGTGGC GTGACGGGTG TGTATTACGC GGCGGGCGGC
GCCATTTGCC GCCTGGTCAA CAAGGACCGC GCCAAACACG GCATCCGCTG CTCGGTCGAG
TCCACCGGGG GTTCGGTGTT CAACGTCAAC ACCATCAAGG CCGGCGAGCT TGATTTCGGT
TTTTCGCAGT CGGACGTGCA GTACAACGCC GTGAAGGGTA CAGGCCAGTA CAAGGATGCT
GGCGCCTACG GCGATTTGCG CGCCGTGTTT GCGGTACACC CCGAACCCTT CACCGTGGTC
GCCCGCAAGG AGGCCAACAT CACGAAGTTC GAGGACTTCA AGGGCAAACG TTTCAACGTC
GGCAACCCTG GTTCGGGTAC GCGTTCCTCG ATGGAGGAAT TGCTGGTAGG GATGGGCTGG
AAGCTCGGCG ATTTTTCGCT GGCCTCCGAG CTGAAGGCCG ATGAGCACGG CCCGGCCCTG
TGCGACGGCA AGATCGACGG GTTCTATTAC GCGGTGGGCC ACCCCAGCGC CAATATCCAG
GACCCGACCA CTACCTGCGG CGCCAAGCTG GTGTCGCTCA CCGGTCCGGT GATTGACAAG
CTGGTGGCCG ACAAGCCTTA TTACGCCAAG GTCACGATTC CCGCCGGCCT GTACCCCAAC
AACCCGCAGC CCACCATGAC CTACGGTGTG CTGGCCACGG TCGTCACCTC CAGCAAGACA
CCGGCCGAAA CCGTTTACCA GGTGACCAAG GCCTTGTTTG ACAACTTCGA CGAGTTCAAA
AAACTGCACC CGGCGCTGGC CAACCTCAAC CCGCAGAACA TGATCAAAGA TGGCCTGAGC
GCACCGCTGC ATGAAGGTGC TGTGCGCTAC TACAAGGAAA AAGGCTGGAT CAAATAA
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| Protein sequence | MSKKFALSAL SALSTSGAAS VASIGIAMIA ALMSAPAFAQ QKFVTIGTGG VTGVYYAAGG
AICRLVNKDR AKHGIRCSVE STGGSVFNVN TIKAGELDFG FSQSDVQYNA VKGTGQYKDA
GAYGDLRAVF AVHPEPFTVV ARKEANITKF EDFKGKRFNV GNPGSGTRSS MEELLVGMGW
KLGDFSLASE LKADEHGPAL CDGKIDGFYY AVGHPSANIQ DPTTTCGAKL VSLTGPVIDK
LVADKPYYAK VTIPAGLYPN NPQPTMTYGV LATVVTSSKT PAETVYQVTK ALFDNFDEFK
KLHPALANLN PQNMIKDGLS APLHEGAVRY YKEKGWIK
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