| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1964 |
|---|
| Symbol | |
|---|
| ID | 4015370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2030584 |
|---|
| End bp | 2031900 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637941631 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_548792 |
|---|
| Protein GI | 91787840 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TAGCTGGTGA CGCCCAACTG CTGTCGGCTG CGGCCGAACT ACGGTCTACA
GAAACGATAC GGACGCGGGC CCGGGGCCTG CTCGAACGAG CACGCCGCGG CGAGTCGGCC
TGGTTCACCG TCAACGACGG GGCGCTGGAC ACGGCCGCCG TGTTGGTCGC CGAACTGACC
CGCGCCCGCT ACCCCGATCT GAAGATTCCG TACCACAGCC GGTGGCGGCA TTTTGAAGCT
GGCGGCGTGG ACCGGACCGG TCAGTTAAAC GCGGCGCTGG CACAGGTTTC GGCGGCCGAA
CGGGCACGCG CCCAGATCGA CCTGGCCCTG GTCAGCGTGC TGCTGGATGC CGGCGCCGGC
CCCGACTGGA CCTACCGGGA GCCCGCGCAG GCGGAACACC CCGGGCACGA ATACAGCCGG
TCGGAAGGTT TGGGCGTGGC CAGCTTCCAC GCCTTCATGG CGGGCCTGTT TTCCAGTGAC
CCATCGCGAC CCTTGCAGGC GGATGCCCAG GGTCTGCAAG CCGTCACGGC CGAACGGCTG
GGCCAGGCCT TCCAGGTCAC GGCGAGCAAC CCGCTGGTGG GCCTGGAGGG GCGTGCGGCC
CTGCTGCGCC GTCTCGGGCA GGCGCTGCAG GACCAACCCG CCGTGTTTGG CCGGCCCGCT
CGCCCCGGCC ATCTGTTCGA CATGCTGGTC AACAAGTCGC CTCAGCCTGC GCCTGCGGAA
CAAAGCGCTC AGGAGGCGCA GCCCACCATC CTCGCGCATG AACTGCTGTC CGTGCTGTTG
ACGGCGCTGG CGCCCATCTG GCCCGCGCAG AACGCCATTG AAAACATCGC ACTGGGAGAC
TGCTGGCGCC ACGTTGCCGC GTGCAGCGGC AGCGTAGCCA AGGGCGCGGC GGCCAGCCTC
ACCGACGGCT GGATGCCGTT TCACAAACTG TCGCAGTGGC TCGCCTATTC GCTGCTGGAG
CCGTTTGAAT GGGCCGGCAT TCGTGTGCAA GGGCTGGACG CCTTGACCGG GCTGCCCGAA
TACCGCAACG GCGGCCTGTT CCTGGACGCT GGCGTGCTGC GCCTGAAAGA CCCCTCGCAG
GCGGACCAGC TGCACGCGGC CAGTGATGAG CTGATTGTGG AGTGGCGCGC GCTGACTGTC
GCCCTGCTGG ACGAACTGGC ACCACTGGTT CGCGAGCAGT TAGGATTGAC CGCTGAGCAG
ATGCCGCTGG CCTGCGTGCT CGAGGGTGGC ACCTGGGCCG CCGGGCGGGC ACTGGCACAG
CAACTGCACG GCGGCAAGCC GCCCCTGAAC ATCCAGAGCG ACGGCACCGT TTTTTGA
|
|---|
| Protein sequence | MKKIAGDAQL LSAAAELRST ETIRTRARGL LERARRGESA WFTVNDGALD TAAVLVAELT
RARYPDLKIP YHSRWRHFEA GGVDRTGQLN AALAQVSAAE RARAQIDLAL VSVLLDAGAG
PDWTYREPAQ AEHPGHEYSR SEGLGVASFH AFMAGLFSSD PSRPLQADAQ GLQAVTAERL
GQAFQVTASN PLVGLEGRAA LLRRLGQALQ DQPAVFGRPA RPGHLFDMLV NKSPQPAPAE
QSAQEAQPTI LAHELLSVLL TALAPIWPAQ NAIENIALGD CWRHVAACSG SVAKGAAASL
TDGWMPFHKL SQWLAYSLLE PFEWAGIRVQ GLDALTGLPE YRNGGLFLDA GVLRLKDPSQ
ADQLHAASDE LIVEWRALTV ALLDELAPLV REQLGLTAEQ MPLACVLEGG TWAAGRALAQ
QLHGGKPPLN IQSDGTVF
|
|---|
| |