| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1923 |
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| Symbol | |
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| ID | 4015443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1982517 |
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| End bp | 1984190 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637941590 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_548752 |
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| Protein GI | 91787800 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01453] group I intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0236907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0335475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGC GAAAAACAGC CGAATCAGTG CTCTCCGCAT TTAGAAATGT GCATGGCCAG
CGCTACGGCT ATGAACTGGT GAGTTATGCG GGCATGTGGA GCAAAGTCAA GGTTGTCTGC
TCCCGCCATG GCGTTTTTGA GGTCACCCCC GAGCACCACT TCAGGGGAGT CGGATGCAGC
AAATGCTACT TCGATAGGCA AAAACTCACT AAAGCAGATT TCATCGCGCG TGCTGAAGTC
CATTTTGGAA ATCGCTTTGG CTATGGAAGC ATTGACGAGT TGCCTGCTGC TGGCGAGAAG
GTTCGCATCA AATGCAAGGT ACATGACCTG TATTTTCTAC AAGAGCCTCG CAATCACAGT
CGTGGTCATG TCGGTTGCCC CAAGTGCAAG TCACTAAAGC TGTCGGGTAG CCGGAGAAGC
CATGGGCAGC TCACGTCAGA GAAGGACTTG ACGAACCAAT TCATCCTGGA TGCACAACAG
GTTCACGGCA ATGCCTATGA CTATAGCGAG TTCAAATATC TGACAGCGCG CACGAAAGGA
AAAATCCTCT GTCCTGTTCA TGGAGAATTT TTTCAAGCGC CAAGTAATCA TCTTCGGGGA
ACCAAATGTC CGGCATGTGC GAAGAAGACG AAGGCCAGCG GTAGTTTCAA ACAGCGTTGC
AGAGAACTAG GCATTGACTA CTGGCGTGCG CTAAAAAGAC GTGAAGCAGG GATGAGCGAT
GAAAAGATCT TTGCGGAAGG CTACGTGCGC GGAGACCGAG AAACCCCCAC AGCGCTGACA
GTGTACGGAG TAAGTTACCC GAACATTGAG TTGGCTTGCA GGGTGCTGCT GCCGACTGCA
AATCCAACGA CGATCGGCCG CTGGATTCGC AGTGGTATGG CGCCAGAAGA GGCGTTTGAA
CGGATACCAA ATCCGGGCTA CGCAGCTGGC TTGATTTATC TAGTGACGCA TGTTGCAAGC
GGCAAGCGGT ATGTGGGTCT AACAATACAG ACGCTGGAGC GCCGATGGAC TTATCACCTA
CAGCAAGCAC GAGCTGGCCA CGTCAGGGGT GCTGACTCCC TTCACGCTGC GATTCGTGAG
CACGGATCGA ACGCATTCAC CATGGTTCAG ATTGACAGCG GCACGACAAA GGTGGATCTT
GAACAGAAGG AGCGCCACTG GATCAACGCT TACGGCACCC TCGTCCCAGC CGGGTACAAC
ATTTCAGCCG GCGGTGTGAG TGGCGGGTCT AACCGTAAGC CTGTGACGAT CGATGGACAA
CAGTTCCCCA GCGTTGAGGC AGCTGTCATA CAGATCTCTA AGAGCCGCGG CATCAGTCTT
CACGCAGCAA AAGCTAGACT CCGGTTCGGC CGCATCGACG TGAAGACTCC GGCAAAAAAA
GGGGAAAGCC TGGTCAAGAC CCCTGCGTAC AAAGCCTGGA GCCGTATCGT TCATGGAGTG
CTGAATCAAA AAGCAAAGGA TTACATCCCT GGCGTGGGTC TTTTCGAGCC TTGGCGAGAC
TTTCAAACAT TCTTTAAAGA TGTCGGTCAG CCCCCCGAGC CAGGCATGGC TTTCACCAGA
CTTGATAAGT CCAAGGGCTT CTTCCCAGAG AATTGCGTGT GGCTGACCAA AAGCGAATCA
AGCAGACTTA ATGCAGTATT GGCTGGAGGC ACTGTCAAAA AGGAAATAGG GTGA
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| Protein sequence | MPKRKTAESV LSAFRNVHGQ RYGYELVSYA GMWSKVKVVC SRHGVFEVTP EHHFRGVGCS
KCYFDRQKLT KADFIARAEV HFGNRFGYGS IDELPAAGEK VRIKCKVHDL YFLQEPRNHS
RGHVGCPKCK SLKLSGSRRS HGQLTSEKDL TNQFILDAQQ VHGNAYDYSE FKYLTARTKG
KILCPVHGEF FQAPSNHLRG TKCPACAKKT KASGSFKQRC RELGIDYWRA LKRREAGMSD
EKIFAEGYVR GDRETPTALT VYGVSYPNIE LACRVLLPTA NPTTIGRWIR SGMAPEEAFE
RIPNPGYAAG LIYLVTHVAS GKRYVGLTIQ TLERRWTYHL QQARAGHVRG ADSLHAAIRE
HGSNAFTMVQ IDSGTTKVDL EQKERHWINA YGTLVPAGYN ISAGGVSGGS NRKPVTIDGQ
QFPSVEAAVI QISKSRGISL HAAKARLRFG RIDVKTPAKK GESLVKTPAY KAWSRIVHGV
LNQKAKDYIP GVGLFEPWRD FQTFFKDVGQ PPEPGMAFTR LDKSKGFFPE NCVWLTKSES
SRLNAVLAGG TVKKEIG
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