Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1808 |
Symbol | |
ID | 4015556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1871889 |
End bp | 1872401 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637941479 |
Product | putative signal peptide protein |
Protein accession | YP_548641 |
Protein GI | 91787689 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000025679 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAAACA CTTTATCGCT GTCCCTTTTA TCCTTGCTGT TGGCCGGTGC GGGGAATTCC GCATGGGCCC AGCAGGTTTA CCGTTGTGTT GCCGCCAACG GCGGCGTGCC AGAGTACATC AACAACGCCA AGGATGCCCA GAACCGGAAT TGCAAGCTGC TGTCGGGTGG CAATGTCACC GTGGTCCAGG GCAACCCCGT GGCCAAGGCG CCTGTGCGTG TCGCTGCGGC GGCGGCTTCT GGCGGTCCGC GAACCGATGG CAGCCCGGAG CAGCGTGCAC GTGACAGCGA CTCGCGCGCC ATTCTGGAGT CCGAGCTGAA AAAGGCCGAG GCCCGATTGG CCGAGCAGCA AAAAGAGTAC AACAACGGCG AGCCTGAAAA GCAGGGTATT GAAGGACGCA ACTACCAACG CTACCTAGAC CGCGTGGCTG AACTCAAGGA AAGCATCGCC CGCAACCAGA GCGATATTGC CGGCATCAAG CGCGAGATTT CGCGTCTCCC GGCCGCAAAT TAA
|
Protein sequence | MKNTLSLSLL SLLLAGAGNS AWAQQVYRCV AANGGVPEYI NNAKDAQNRN CKLLSGGNVT VVQGNPVAKA PVRVAAAAAS GGPRTDGSPE QRARDSDSRA ILESELKKAE ARLAEQQKEY NNGEPEKQGI EGRNYQRYLD RVAELKESIA RNQSDIAGIK REISRLPAAN
|
| |