| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1769 |
|---|
| Symbol | |
|---|
| ID | 4015593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 1828301 |
|---|
| End bp | 1829461 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637941441 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_548603 |
|---|
| Protein GI | 91787651 |
|---|
| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.122571 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCA TGAGCTCCCC CCATTCCGGC CTGGCACCTG CCGGGCAGGA TCGCCTGGCG
CACATCAGCC AGGCACGCCA GGCAATTCTT TACGGTGGCC GACCACCCGC CGGCACGGCC
CTGCCCATCG AGAGCTGGAT AGAGCGCTCC TGGCTGCGCT GCCTGGGCAA CGGCTACCGG
CCGGAGCACG AGCCCTCGTT TGACATGGTT GCAGCCCCGG CGCTGCGGCG TACCCTGGAG
TCCAACCGTG TGCTGGTGCA GGCAGCGCGG CCGGTGCTTG AGGCGCTGGG CCGCGCCATT
GCCGACACCC GTTACTTTGC CATACTCGCC AACCAGCACG GCGTGGTGGT CGATGTGAAC
GGCCCTGTCG ACCGGCGTGA CCGGCGAGCC GACCTGATCA CGCGCATAGG GACGGACCTT
TCAGAGCAGC GGGTCGGCAC CACGGCGATC AGCGCGGCGC TGACGGAGCT GCAGCCGGTC
TGGCTGCACC GCGGTGAGCA CTTTTTCAAC ATGACCTCGG TGTATAGCTG CGCTGGCGCG
CCGCTGTTTG GCCCTGATGG CCGCTGCGTC GGCATGCTGG ACCTGACAGG CATCGAAGCG
GCCGAGCGGC CGGAGCTCAA GCACCTGGTC ACCCAATCTG CACGCAGCAT TGAAAACGCG
CTCACCCTGA GCCTTGCGCA TCGCCTGATG ATCCGGCTGA ACTGGCCGGG CCGCACACTG
GGCGACGACG CCGACGGGCT GATCTGCCTC GACGCCGATG GCTGGGTGAC GGGTGTCAAC
CATGCGGCCC GGCAAATGGT GCCGCAGCTC ATGGCGCCCA GCCCGGTGCC AGTGCATGTC
AGCGAGCTGC TGGCCCTACC CTGCGACATG CTGTTTGATG CCGCGCGGCG CAACAAGTTT
GGCGATGCCG AACCGCTGGA GGTGCCTTTG TGGTCAGGCC TGCGCCTGCA CGCCCTTGCG
CTCGCCCCGG GGCAAACCAG CCCGCCCACG GCGCGCACGG GCAAAGCAGC CGATGAGCGC
ATGCCACTCA GGGAAGTGGA GATCAGCCTG ATCCGCAAGG CCGTGGATGA CGCCAAAGGC
AATGTCATGA AAGCCGCGCG TGAGTTGGGC ATCAGCCGTG CAACGGTGTA CCGCAAACTT
GGAAACAAAA AACCCCGTTA G
|
|---|
| Protein sequence | MASMSSPHSG LAPAGQDRLA HISQARQAIL YGGRPPAGTA LPIESWIERS WLRCLGNGYR
PEHEPSFDMV AAPALRRTLE SNRVLVQAAR PVLEALGRAI ADTRYFAILA NQHGVVVDVN
GPVDRRDRRA DLITRIGTDL SEQRVGTTAI SAALTELQPV WLHRGEHFFN MTSVYSCAGA
PLFGPDGRCV GMLDLTGIEA AERPELKHLV TQSARSIENA LTLSLAHRLM IRLNWPGRTL
GDDADGLICL DADGWVTGVN HAARQMVPQL MAPSPVPVHV SELLALPCDM LFDAARRNKF
GDAEPLEVPL WSGLRLHALA LAPGQTSPPT ARTGKAADER MPLREVEISL IRKAVDDAKG
NVMKAARELG ISRATVYRKL GNKKPR
|
|---|
| |