Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1672 |
Symbol | |
ID | 4015691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1726320 |
End bp | 1727207 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637941344 |
Product | LysR family transcriptional regulator |
Protein accession | YP_548506 |
Protein GI | 91787554 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.57433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTC GCCACCTCCG CTATTTTCTG GTCCTGGCCG AAGAACTGCA CTTCGGCCGG GCCGCGCGGC GCCTGTCGAT TTCGCAGCCG CCGCTGTCGC TGAACATCCA GCAGCTGGAG GCCTCTGTCG GCGCGAAGCT GTTCACCCGC AACAGCAAGG CGGTGCAATT GACGGCGGCG GGGCTGGCCT TTGTGCCGGC GGCGCGTGCG CTGATTGACC AGGCCGCGCA GGCGGCCAGC CACGCGCGCG ACGTGGGGCA GGGCATGGCC GGCAGCCTGG CCATCGGGTT TTCCGGCACC ATGCTTTACA GCGGCTTGCC CAACATCCTG GAGCGCTTCC AGGCCGAGCA TCCTTTGCTG CGGCTGACGC TGAAGGAGCT CAGCTCCAGC GAGCAGCTGA TCGAGCTGGC GCATGACCGG CTGGACCTCG GCTTTGTGCA CACCACGCGC GTGCCGCCCG AGCTGTCGCA GATCCTCGTG TCCAGCCAGG CGTTTGTGTG TTGCCTGCCG GCGGGCCATG CGCTGGCGCG CAAGCGCTCC TTGTCACTCA AGCAGTTGCA CGGCGAGGCG TTTGCCGTGG TGTCGCGTGC GGTGTCGCCT GACTACCACG AGCGCATCCT GGCGATCTGC ACCGAAGCCG GCTTTTATCC GGAATTCCGC TACGAACTGC GGCACTGGCT GAGCGTGGTG TCGCTGGTGT CGCAAGGCAT GGGCGTGGCG CTGGTGCCGG CGGCGCTGCG GCAGTCGGCC ATGGCCGGCG CGGCCTTTGT CCCGCTGGAT GCCGTCACCA CGCCTTACGA CACGCACTGC CTCTGGAAGA CTGCGCGCGA CCACCAGTCG CTGGCGGCCT TTGTGAAAGC GGTGCGCGCC ATCGCGCCGC CCGTCTGA
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Protein sequence | MEFRHLRYFL VLAEELHFGR AARRLSISQP PLSLNIQQLE ASVGAKLFTR NSKAVQLTAA GLAFVPAARA LIDQAAQAAS HARDVGQGMA GSLAIGFSGT MLYSGLPNIL ERFQAEHPLL RLTLKELSSS EQLIELAHDR LDLGFVHTTR VPPELSQILV SSQAFVCCLP AGHALARKRS LSLKQLHGEA FAVVSRAVSP DYHERILAIC TEAGFYPEFR YELRHWLSVV SLVSQGMGVA LVPAALRQSA MAGAAFVPLD AVTTPYDTHC LWKTARDHQS LAAFVKAVRA IAPPV
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