Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1632 |
Symbol | |
ID | 4015729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1686401 |
End bp | 1687936 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637941304 |
Product | 3-hydroxyacyl-CoA dehydrogenase |
Protein accession | YP_548466 |
Protein GI | 91787514 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.395399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGA ACTCGACAGT CAACAAGCTC GACGAGGCGC CCCTGCTGGT GGTCGGCGCC GGTGTCATGG GGGTCGGTAT TGCGCAGGTG GCGGCACAGG CCGGTCATGC GGTGATGCTT TACGACGCCC GCGAAGGCGC GGCTGCCGAA GCGAAAACCA AGCTGGCCAA GAGCCTTGAT GCACTGGTCG CGAAAGGCAA GCTGACGGCA CAAGGCGTGT CGCAAACGCT GTCGCGCATT GAGGCCATCG CCTCGCTGGC AGCGGCTGCC CCAGCGCGGC TGGTGATCGA AGCCATCGTC GAAAAGCTCG ACGTCAAACG CGGACTGTTC CAGCAGCTCG AAGCCATCGT GGCCGCCGAT TGCGTGCTCG CCACCAACAC CTCGTCGATC TCGGTCACGG CCATTGCCAA TGGCCTGCAA CATCCGGCGC GCTTGGTCGG TATGCACTTT TTTAATCCGG TGCCGCAGAT GCGGCTGGTC GAGGTGGTCT CGGGCCTGCA GACCGACCCG GCGGTGGCGG CGCTCATTTT TGACCTGGCC GGCGTCTGGG GCAAGGTGGC AGTGCATGCG CGCTCGACGC CGGGTTTCAT CGTCAACCGC ATCGCCCGGC CCTTTTACGC CGAAACGCTG GCACTGCTGC AGGAGCAGGC TGCCACGCCT GCGGTGCTCG ATGCCTGTCT GCGTGCCGTC GGGTTTCGCA TGGGCCCCTG CGCCTTGATG GACCTGATTG GCCACGACAC CAATTTTGCG GTGACCAGTT CGGTCTATGA GGCTAATTTC TACGACAAGC GCTTTGCGCC GTCACTGGTA CAGCGTGAGC TCGTCGACGG TGGTTTGCTG GGGCGCAAGT CGGGCCGCGG TTTTTACGAC TACACCGCGG GTGCCGTTCA ACCCGGGAAC ACCGATTTCG CACCGGTGCC TCTACCTGTC GCACCAGTCG CGCAATCCTT GTGCGTGCAG GGAGTTGGGC CGGTGGCCGA GCGACTGGTT GCGGCACTGG CGCAGGCCGG CCGCGCTTTT GCGCGCGATG AAAGCAGTGA CTGGGTCGGG CTGGCGATAG TCGCTGACGG TGCCGAACTG CGGCTGACTG ACGGCAGGCC GGCTTCGCAG CTGGGCGCTG AAGTGGCCGT GTTTGACCTG CCGGTGTCCA GCGAGACCGG CATCGCGCTG GCCTGGGCGC CGTCCTCGCG TGCCTCCGCG GGGTGGTGTG CCGCCGCCGC CACCTGGCTG CAGGCGCTGG GCTTCAGCCC GCAGCGCATC GCCGATGTCC CGGGTCTGGT GGTGGCGCGC ACCCTCGCGA TGCTGATCAA TGAAGCGGCC GATGCGGTGC TGCACGGGGT GTGCACGCCG GAGGGCGCCG ACGCCGCCAT GAAGCTGGGA GTTAATTACC CAGCCGGGCC CTTTGAGTGG CTGGCGCAAT GGGAAACCCG CAACGTCATT GGCTGTTTAG ACGCGCTGGA CGCGCATTAC CGTGGCGAGC GCTACCGCGT CAGCCCCTGG CTGCGCCAAC GGGCCTGGCA GGAGGGTGTG CAATGA
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Protein sequence | MTMNSTVNKL DEAPLLVVGA GVMGVGIAQV AAQAGHAVML YDAREGAAAE AKTKLAKSLD ALVAKGKLTA QGVSQTLSRI EAIASLAAAA PARLVIEAIV EKLDVKRGLF QQLEAIVAAD CVLATNTSSI SVTAIANGLQ HPARLVGMHF FNPVPQMRLV EVVSGLQTDP AVAALIFDLA GVWGKVAVHA RSTPGFIVNR IARPFYAETL ALLQEQAATP AVLDACLRAV GFRMGPCALM DLIGHDTNFA VTSSVYEANF YDKRFAPSLV QRELVDGGLL GRKSGRGFYD YTAGAVQPGN TDFAPVPLPV APVAQSLCVQ GVGPVAERLV AALAQAGRAF ARDESSDWVG LAIVADGAEL RLTDGRPASQ LGAEVAVFDL PVSSETGIAL AWAPSSRASA GWCAAAATWL QALGFSPQRI ADVPGLVVAR TLAMLINEAA DAVLHGVCTP EGADAAMKLG VNYPAGPFEW LAQWETRNVI GCLDALDAHY RGERYRVSPW LRQRAWQEGV Q
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