| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1606 |
|---|
| Symbol | |
|---|
| ID | 4015736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1657659 |
|---|
| End bp | 1658144 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637941277 |
|---|
| Product | colicin V production protein |
|---|
| Protein accession | YP_548442 |
|---|
| Protein GI | 91787490 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCTG TTGACTGGAT TTTGCTGGCG GTATTGGTCT TCTCGCTGGT GCTGGGCGCC
TGGCGCGGGC TGGTTTATGA GGTTTTGTCG GTACTGGGGT GGGTGGTGGC GTTTTTTGCG
GCGCAATGGT TTGCGCCCGA GGTGGCCGCC CGGTTGCCCA TCCAGTCCGC CTCGAATCCG
GTGCGCTATG CGGCTGCGTT TGTGCTGGTA TTCATTGTTG CGGTGTTTGC GGCCGGTTTG
CTGGCTTTTT TGCTGAAGAA GCTGGTCGAA GCCGTTGGCT TGCGGCCGGT GGACCGCGTG
ATGGGCGCGG GATTTGGCCT GCTGCGCGGA CTGATCCTGC TGCTGGCCGC CACGGTGGTG
ATTGACATGA CGGGGCTCAA GACCACTGAA TGGTGGCGGG AGTCCAGAGG CGCGGCCATG
CTGACGGCCA CGCTCAAAGG TTTGCAGCCG GTTCTGCCGG AGAAGTTTGC GAAGTATTTG
AAATAG
|
|---|
| Protein sequence | MAAVDWILLA VLVFSLVLGA WRGLVYEVLS VLGWVVAFFA AQWFAPEVAA RLPIQSASNP
VRYAAAFVLV FIVAVFAAGL LAFLLKKLVE AVGLRPVDRV MGAGFGLLRG LILLLAATVV
IDMTGLKTTE WWRESRGAAM LTATLKGLQP VLPEKFAKYL K
|
|---|
| |