| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1578 |
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| Symbol | |
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| ID | 4015780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1627201 |
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| End bp | 1627581 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637941249 |
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| Product | aspartate alpha-decarboxylase |
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| Protein accession | YP_548415 |
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| Protein GI | 91787463 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0853] Aspartate 1-decarboxylase |
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| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.301231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCCGAA CCCTGCTCAA ATCCAAGATC CACCGCGTCG CGGTAACCCA CTGCGAGTTG
CATTACGAAG GCTCCTGCGC CATCGATGAA GACCTGCTCG ACGCGGCCAA CATCGCCGAG
AACGAGCAAA TCCATATCTG GAACATCAAC AACGGCGAGC GCTTTGTCAC CTATGCGATC
AAGGGGGAGC GCGGCTCCGG CATGATTTCG GTCAACGGCT CGGCCGCACG CCGCGCCGCT
GCCGGTGATC TGATCATCAT CGCGGCCTTT GCCCAGGTGC ACAACGACCA GGTGAGCGCA
CATGAACCCC AACTGGTGTT TGTGGACGAC AAGAACCGCC AGACCGAGTT GCGCCACAAG
GTGCCAACCC AACGCATGTG A
|
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| Protein sequence | MFRTLLKSKI HRVAVTHCEL HYEGSCAIDE DLLDAANIAE NEQIHIWNIN NGERFVTYAI
KGERGSGMIS VNGSAARRAA AGDLIIIAAF AQVHNDQVSA HEPQLVFVDD KNRQTELRHK
VPTQRM
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