Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1501 |
Symbol | |
ID | 4015858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1557313 |
End bp | 1558110 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637941181 |
Product | extracellular solute-binding protein |
Protein accession | YP_548347 |
Protein GI | 91787395 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCA AAGCGCTTTC CACTCTGGCT GGCCTGTTTG CCAGCACCGT CCTGACCCTG GTTTCTCCCG CCCACGCGGC TGATGATTCG CTCACCTCCA TCATGGCCAA GAAGTCGATT GCCCTGGGTG TTGCCTCCGA CTTCCCGCCC TACGGCTTTA TGGGCTCCGA TTTCAAACTC ACCGGCGTGG ACGTGGCCAC GGCGCAACTG ATTGCCGACA AGCTGGGCGT GAAGGCCGAG TTTGTGCCGG TCAGCACACC CAACCGTATT CCCTACCTGC AGACCAAGAA GATCGACCTG ATCGTCTCGG CGCTGGGCAA GAATGCCGAG CGCGAGAAGG TGATCGATTT CACCGTGGCT TACGCTCCGT TCTTTCAAGC CGTTTTCGGC CCCAAGGCAC TGAGCATCAA GAGCTTTGGC GACCTGGCGG GCAAGACCAT CGCGGTCACG CGCGGCACCA TTCAGGACGA TGTGCTGCAG CAAGTGGCAC CGCCCACACT GAAGATCATG CGCTTTGAAG ACGATGCCAC CACGGTGGCG GCCTTTATCT CACAACAAAC CCAGTTGCTC GCTACCGGTG CCGCAGTGGC CGCAGCCGCC GTTCAGAAAA ATCCTCAGGT TCAGGCTGAA TACAAGCTGT TGCTGAAAGA CTCGCCCAAC TTCATCGGTG TGCGCAAGGG TGAAACCGCG CTGCTGACCA AAGTGAACGA CATCCTGCGC GCCGCCAAGG CCGACGGCAC GCTGGAGCAG TACTCGCAAA AATGGCTGGG CCGCGGCACC GGCGTGCTGC CCGACTAA
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Protein sequence | MKLKALSTLA GLFASTVLTL VSPAHAADDS LTSIMAKKSI ALGVASDFPP YGFMGSDFKL TGVDVATAQL IADKLGVKAE FVPVSTPNRI PYLQTKKIDL IVSALGKNAE REKVIDFTVA YAPFFQAVFG PKALSIKSFG DLAGKTIAVT RGTIQDDVLQ QVAPPTLKIM RFEDDATTVA AFISQQTQLL ATGAAVAAAA VQKNPQVQAE YKLLLKDSPN FIGVRKGETA LLTKVNDILR AAKADGTLEQ YSQKWLGRGT GVLPD
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