| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1478 |
|---|
| Symbol | |
|---|
| ID | 4010912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 1529988 |
|---|
| End bp | 1531010 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637941158 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_548324 |
|---|
| Protein GI | 91787372 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.166362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCTC ACCTTCCCCC CGGTTCCGGC CGGCGCCGCC TGCTCTCGCA CAGCCTGAAG
TTCGCCGCCC TGGCGCTGGC CTTGTCGGCC GCCTGGGTTC CGCCCGCAAC CGCCCAGGCG
GCTTACCCGT CCAGGCCCAT CAAGCTGATA GCGCCTTTTG CCGCGGGCGG CGCGGCCGAC
ACGGTGGCGC GCATCCTGGC GCCCAAGCTG TCCGAATCGC TGGGCCAGCC CATCATCATT
GAAAACCGCG CCGGCGCGAG CGGCGCCATC GGTTCCGCCT ATGTCGCGGC GGCAGCGCCG
GACGGCTACA CCCTGCTGCT CAACCTGGGC CCGCCGCACC AGACCGTGCA GTTCTTTACC
AAGGGGATCA AGTACGACCC GGTCAAGGAC TTCACCGCCA TTTCGCACGT GGCCACCGCG
CCGCAGTCGC TGGTAGTGCC CGCGTCCTCG CCGATCAAGT CGGTGGCCGA TTTCGTCGCG
GCGGCCAAGG CCTCGCCCAA GGGCCTGTCC TATGCGACCT CCGGTTCGGG GACCTCGCAG
CACCTGGCCG GCCTGCTGCT GGCGAGTTCG CAAAAACTCG CGCTGACGCA CGTCGGCTAC
CGGGGCGGCG CGCCGGCCCT GACCGACGTC GTCGGCGCAC AGATCGACGC CGGCCTGCTG
GTGCTGTCCA ACACCCTGCC TTACATCCAG GCCGGAAAAC TCCGCGCGCT GGGCGTGGTG
GAAAGCCACC GCTCCAAATC TGCCCCCAAC ATCCCGACGC TGGCCGAAGG CGGCCTCACG
GGCTTTTCGG TGCCCGACAC CTGGGTGGGC GTCATGGGGC CAGCCGGCCT TCCCGCACCC
ATCGTGCAGC GGCTCAATGC CGACATCCTC AATATCCTCC GCAATCCGGA CGTCAAGGCG
CAACTGCAGC AAAACGGCTA TGACGCCGTC GAAGCCTCGC CCGAAGAGTT CGCCAGGCTG
CTGGCCGACA GCACCCAGGT CTACAAGTCC ATCGTCCAGA AAGCCGGCAT CACGCCCGAA
TGA
|
|---|
| Protein sequence | MTPHLPPGSG RRRLLSHSLK FAALALALSA AWVPPATAQA AYPSRPIKLI APFAAGGAAD
TVARILAPKL SESLGQPIII ENRAGASGAI GSAYVAAAAP DGYTLLLNLG PPHQTVQFFT
KGIKYDPVKD FTAISHVATA PQSLVVPASS PIKSVADFVA AAKASPKGLS YATSGSGTSQ
HLAGLLLASS QKLALTHVGY RGGAPALTDV VGAQIDAGLL VLSNTLPYIQ AGKLRALGVV
ESHRSKSAPN IPTLAEGGLT GFSVPDTWVG VMGPAGLPAP IVQRLNADIL NILRNPDVKA
QLQQNGYDAV EASPEEFARL LADSTQVYKS IVQKAGITPE
|
|---|
| |