| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1422 |
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| Symbol | |
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| ID | 4011007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1468645 |
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| End bp | 1469916 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637941102 |
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| Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_548269 |
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| Protein GI | 91787317 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.107293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACCA ACACCAACAC CGATACCAAC ACGAACTCCG ACACCGCCTA CAAGCAGCTT
GACCGCTGGA TCGACGACCA CTTCGACGAG GAAGTGCGAT TCCTTCAGGA ACTCATACGC
GTACCCACCG ACACGCCGCC GGGCAACAAC GCGCCACACG CCGAGCGCAC CGCCGAGCTG
CTCCAGGCCT TTGGCTTTGA GGCTGAAAAG CACCCCGTGC CCGAGGCCGA TGTCCGGGCC
TATGGACTTG AGTCCATCAC CAACCTGATC GTGCGCCGCC GGTATTCGAA ACCCGGCGAA
GGACGGACGA TTGCACTCAA TGCCCACGGC GATGTGGTGC CGCCCGGCGA GGGCTGGACC
AAAGACCCGT ATGGCGGCGA GATCGAAGAC GGCAGGATTT ACGGGCGCGC CGCGGCCGTC
AGCAAATGCG ATTTCGCCAG CTTCACCTTT GCCGTGCGGG CACTTGAGGC ACTGGGCGCG
CCACTGAAAG GCGGTGTCGA GCTGCACTTC ACCTATGACG AAGAGTTTGG CGGCGAAATG
GGGCCGGGCT GGCTGCTGCG CCAGGGCCTG ACCCACCCCG ACCTGATGAT CGCGGCGGGC
TTTTCGTATG AAGTCGTGAC CGCCCACAAT GGCTGCCTGC AGATGGAAGT CACCGTGCAC
GGCAAGATGG CCCACGCAGC CATTCCCGAC ACCGGCGTTG ACGCGCTGCA GGGCGCGGTG
CATATCCTCA ATGCCCTGTA TGCGCAAAAC GCGCTATACC GCAAGGTCAC CTCCGGGGTC
GCGGGCATCA GCCATCCCTA CCTGAACGTC GGCCGCATCG AGGGCGGGAC CAACACCAAC
GTCGTGCCCG GCAAGGTGAC CTTCAAGCTG GACCGCCGCA TGATCCCGGA AGAAAACCCG
GTCGAAGTCG AAGCCACCAT CCGCCAGGTG ATTGCCGACG CCGCTGCCGG CTGTGCGGGC
ATCACCGTGA ACATCAAGCG GCTGCTGCTG GCCAACTCGA TGAAGCCGCT GGCGGGCAAC
ATGCCTCTGG TGGACGCGAT CCAGAAGCAT GGCGAGGCGC TGTTCGGCCA GAAGATCCCG
GCCATGGGCA CGCCGCTGTA TACCGATGTG CGCCTGTACG CCGAGGCCGG CGTGCCGGGT
GTGATCTACG GCGCCGGGCC GCGCACCGTG CTCGAATCGC ACGCCAAGCG CGCCGACGAG
CGGCTGGAGC TGGAAGACCT GCGCCGTGCC ACCAAGGTGA TAGCCCGCAC GCTGGTGGAT
TTGCTGGCCT GA
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| Protein sequence | MTTNTNTDTN TNSDTAYKQL DRWIDDHFDE EVRFLQELIR VPTDTPPGNN APHAERTAEL
LQAFGFEAEK HPVPEADVRA YGLESITNLI VRRRYSKPGE GRTIALNAHG DVVPPGEGWT
KDPYGGEIED GRIYGRAAAV SKCDFASFTF AVRALEALGA PLKGGVELHF TYDEEFGGEM
GPGWLLRQGL THPDLMIAAG FSYEVVTAHN GCLQMEVTVH GKMAHAAIPD TGVDALQGAV
HILNALYAQN ALYRKVTSGV AGISHPYLNV GRIEGGTNTN VVPGKVTFKL DRRMIPEENP
VEVEATIRQV IADAAAGCAG ITVNIKRLLL ANSMKPLAGN MPLVDAIQKH GEALFGQKIP
AMGTPLYTDV RLYAEAGVPG VIYGAGPRTV LESHAKRADE RLELEDLRRA TKVIARTLVD
LLA
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